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The map label for this gene is gerIA [H]

Identifier: 218904258

GI number: 218904258

Start: 2972501

End: 2973946

Strand: Reverse

Name: gerIA [H]

Synonym: BCAH820_3142

Alternate gene names: 218904258

Gene position: 2973946-2972501 (Counterclockwise)

Preceding gene: 218904259

Following gene: 218904257

Centisome position: 56.08

GC content: 33.33

Gene sequence:

>1446_bases
TTGAAACCACATGAAAAAGTACCTGTTCACTCTATAAAATCTTTGCAGGAATTAATGCAATTACTAAAAAAATCTAAAGA
TTTTATAACGTTGGAAATTGCTTCTAATAATTCCTCTATAGTCATTTCATATTTTAGAACATTAATCGATGTAAATATAT
TTCATGAAGAGGTTTTGACTTATATAAAAGAGAAGAACTTCGATTCGTTACAAGATATTCAGGATAGTATTTTAAATGGC
TATATACTTATTCAGTTTGATACAGATACATTAAATTGTTTGTTAGTAAATGTGTCAAAGAAAGAAAAAAGGGATATTAC
AAAAGCTGAAATTGAATACAATATTGTGGGTCCGCAAATCGCATTTGTCGAAGATTTAGATGTGAATTTAAATTTGGTAC
GTAGAAAGCTTCCAACACCTTATTTACAAATGAAGGAATTGAAAGTAGGCGCGCTCTCTAACACAACTGTTGCAATTGTA
TTTATTGAGGGAATTGTAAATGATCAAAATCTACAAGAAATTATAAAACGGGTAAGCCAAATAAAAACAGACCATGTTTT
GGATAGTACTTATTTGATTCAGTTAATTGCAGACAACCCGAATTCTATATTCCCTCAATTTTTGAATACAGAACGTCCTG
ACCGTGTAGCAGCTGTATTAGCAGAAGGGAAAATTGCACTTTTTGTAGATGGCTCGCCTTATGCTATCACTCTTCCAACA
ACATTAATTGACTTTTTTTCTACGACAGAAGATTATACCATGCCTTGGATTATGGCCTCATTTTTTCGACTGTTAAGGAT
TTTTGCTTTTATCTTTTCTGTTTTAACGACTCCATTATATGTTGCGATCTTAACATATCATTATGAGCTAATTCCAAAAG
AACTTCTTGAAACGTTGATCATATCGAGAAGTAAAGTACCTTTTCCTCCAGTCATTGAAGCACTTTTTTTAGAAATAACG
ATTGAATTACTGAGAGAAGCGGGGACACGTTTACCAACTAAAGTGGGTCTAACTGTCGGTATAGTAGGGGGTATTGTTAT
TGGACAAGCATCGGTAGAGGCAAGTCTTACAAGTAACGTACTTATTATCATTGTTGCACTTTCAGCTCTTAGTTCATTTA
CAGCACCAATATATCGAATTGGTAATACAATTCGAGTAATTCGTTTTCCTTTTATAATAGCTGCACACCTGTTGGGCTTA
TTAGGAATTGTTTTAACAAGTTCTTTACTTTTAGCACGCCTATTACGTACAGAATCATTAAGACGTCCTTATTTGTTCCC
TTTTTATCCTACACGCCCTACAGATTGGAAAGACAGCATTATACGTATGCCAATCTCAGCGATGTTCCGACGTCCTATTT
TTTCAAGGTCTAAACAGCGTTTTCGTTTTAATCCAGAAGAGGTAGAGAAAAATAAAATCAAATCACGAAATGATTTTGAT
GATTGA

Upstream 100 bases:

>100_bases
TTTTTAAGGAGCATATTGACATATAAATATCCCTCATTTTTAAAATAGAAATTTCTAAAAACTATATATAGGTTCTTTTT
GAAAGGAAGGGTATTATCAA

Downstream 100 bases:

>100_bases
AATTAACAGGGAGGAGCATTATGAAACAGGTCCCAATTGAGTATCAAGTCTCTCCATTTATGGTATTTTTTTTAATTATT
ACTATACAGATGGGGGTTGG

Product: spore germination protein, GerA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNNSSIVISYFRTLIDVNIFHEEVLTYIKEKNFDSLQDIQDSILNG
YILIQFDTDTLNCLLVNVSKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYLQMKELKVGALSNTTVAIV
FIEGIVNDQNLQEIIKRVSQIKTDHVLDSTYLIQLIADNPNSIFPQFLNTERPDRVAAVLAEGKIALFVDGSPYAITLPT
TLIDFFSTTEDYTMPWIMASFFRLLRIFAFIFSVLTTPLYVAILTYHYELIPKELLETLIISRSKVPFPPVIEALFLEIT
IELLREAGTRLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGNTIRVIRFPFIIAAHLLGL
LGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRMPISAMFRRPIFSRSKQRFRFNPEEVEKNKIKSRNDFD
D

Sequences:

>Translated_481_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNNSSIVISYFRTLIDVNIFHEEVLTYIKEKNFDSLQDIQDSILNG
YILIQFDTDTLNCLLVNVSKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYLQMKELKVGALSNTTVAIV
FIEGIVNDQNLQEIIKRVSQIKTDHVLDSTYLIQLIADNPNSIFPQFLNTERPDRVAAVLAEGKIALFVDGSPYAITLPT
TLIDFFSTTEDYTMPWIMASFFRLLRIFAFIFSVLTTPLYVAILTYHYELIPKELLETLIISRSKVPFPPVIEALFLEIT
IELLREAGTRLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGNTIRVIRFPFIIAAHLLGL
LGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRMPISAMFRRPIFSRSKQRFRFNPEEVEKNKIKSRNDFD
D
>Mature_481_residues
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNNSSIVISYFRTLIDVNIFHEEVLTYIKEKNFDSLQDIQDSILNG
YILIQFDTDTLNCLLVNVSKKEKRDITKAEIEYNIVGPQIAFVEDLDVNLNLVRRKLPTPYLQMKELKVGALSNTTVAIV
FIEGIVNDQNLQEIIKRVSQIKTDHVLDSTYLIQLIADNPNSIFPQFLNTERPDRVAAVLAEGKIALFVDGSPYAITLPT
TLIDFFSTTEDYTMPWIMASFFRLLRIFAFIFSVLTTPLYVAILTYHYELIPKELLETLIISRSKVPFPPVIEALFLEIT
IELLREAGTRLPTKVGLTVGIVGGIVIGQASVEASLTSNVLIIIVALSALSSFTAPIYRIGNTIRVIRFPFIIAAHLLGL
LGIVLTSSLLLARLLRTESLRRPYLFPFYPTRPTDWKDSIIRMPISAMFRRPIFSRSKQRFRFNPEEVEKNKIKSRNDFD
D

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 54742; Mature: 54742

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNNSSIVISYFRTLIDVNIFHEEVLT
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
YIKEKNFDSLQDIQDSILNGYILIQFDTDTLNCLLVNVSKKEKRDITKAEIEYNIVGPQI
HHHHCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCHHHHCCCHHHEEEEEECCEE
AFVEDLDVNLNLVRRKLPTPYLQMKELKVGALSNTTVAIVFIEGIVNDQNLQEIIKRVSQ
EEEECCCCCHHHHHHHCCCCCHHHHHHEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
IKTDHVLDSTYLIQLIADNPNSIFPQFLNTERPDRVAAVLAEGKIALFVDGSPYAITLPT
HHHHHHCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCEEEEECCCCEEEECHH
TLIDFFSTTEDYTMPWIMASFFRLLRIFAFIFSVLTTPLYVAILTYHYELIPKELLETLI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRSKVPFPPVIEALFLEITIELLREAGTRLPTKVGLTVGIVGGIVIGQASVEASLTSNV
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHEEECCHHHHHHHCCH
LIIIVALSALSSFTAPIYRIGNTIRVIRFPFIIAAHLLGLLGIVLTSSLLLARLLRTESL
HHHHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPYLFPFYPTRPTDWKDSIIRMPISAMFRRPIFSRSKQRFRFNPEEVEKNKIKSRNDFD
CCCEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHCCHHHCCCCHHHHHHHHCCCCCCCC
D
C
>Mature Secondary Structure
MKPHEKVPVHSIKSLQELMQLLKKSKDFITLEIASNNSSIVISYFRTLIDVNIFHEEVLT
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
YIKEKNFDSLQDIQDSILNGYILIQFDTDTLNCLLVNVSKKEKRDITKAEIEYNIVGPQI
HHHHCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCHHHHCCCHHHEEEEEECCEE
AFVEDLDVNLNLVRRKLPTPYLQMKELKVGALSNTTVAIVFIEGIVNDQNLQEIIKRVSQ
EEEECCCCCHHHHHHHCCCCCHHHHHHEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHH
IKTDHVLDSTYLIQLIADNPNSIFPQFLNTERPDRVAAVLAEGKIALFVDGSPYAITLPT
HHHHHHCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCEEEEECCCCEEEECHH
TLIDFFSTTEDYTMPWIMASFFRLLRIFAFIFSVLTTPLYVAILTYHYELIPKELLETLI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRSKVPFPPVIEALFLEITIELLREAGTRLPTKVGLTVGIVGGIVIGQASVEASLTSNV
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHEEECCHHHHHHHCCH
LIIIVALSALSSFTAPIYRIGNTIRVIRFPFIIAAHLLGLLGIVLTSSLLLARLLRTESL
HHHHHHHHHHHHHCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPYLFPFYPTRPTDWKDSIIRMPISAMFRRPIFSRSKQRFRFNPEEVEKNKIKSRNDFD
CCCEEEECCCCCCCCHHHHHHHCCHHHHHHCHHHHCCHHHCCCCHHHHHHHHCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]