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The map label for this gene is ykoS [H]

Identifier: 218903717

GI number: 218903717

Start: 2473534

End: 2475213

Strand: Reverse

Name: ykoS [H]

Synonym: BCAH820_2601

Alternate gene names: 218903717

Gene position: 2475213-2473534 (Counterclockwise)

Preceding gene: 218903721

Following gene: 218903712

Centisome position: 46.68

GC content: 30.95

Gene sequence:

>1680_bases
ATGTTTTTAAACCAAAATCAAAAAGAAAGAAAGTTGTTTGTTTTTGCAACAATTATACTCATTCTCTATTTGTCTCCTTT
ATTTATTCTTGGAGAAAATGCGCATATTCGCATTCATGATAATCTTGATTCCAATTTGTCCTGGTATAAGGTTTTGACAT
GTAGTGGAGAGATACAAGGTCCGATTAATAGTACAATTCCACAGGTGATAAATAATCAATTGTCAAGAAACGCCTTTAAC
ACAGAATTTAGTGGTATTGTATGGTTGTATGCTTTTTTTCCAAATATGGTTGCTTATGTATTAAGTCAGACAATTACAAG
AGTGATTGCTTTTATAGGCATGTATGTACTTTTAAAACATCATTTTTTACCAAAAGAGGAATGGATGGTCATTTCAATAG
GAGTTTCATTAACTTTTGCTCTTACCCCTTTTTGGCCATCAGGAATGCTTAGTACTCTGGGAATGCCTCTTGCACTTTGG
GCATTTTTAAATATTCGAAAAGGGGAAAAATTGTGGAAGAACTATTTCGTACTTACTCTAATCCCTCTATATTCGAGTAT
TGTTTTAGGTTTTTTCTTTTTTTTAAGTAGCATAGGGATACTCTGGTTAGTTGACTTAGTAGTAAAAAAAGAATGGAACT
TTCGTTTTCTTTTTTCAATTATTTATATGACGCTCATTTACATGATTGTAGAATATCGCTTAGTAACTTCCTTCTTTTTA
TCAACTGCACCTAACAGTAGAGATGAATATTTTCATGCAAGATTATCGTTATGGCGGTCTCTCCGACTTACAGTGAAAAA
TTTTCTTTTAGGACATACCCATGTCATGACAGTCCATACATTTGTTATTTTACCTACAATACTTATTGCGTTGTATTTTA
TCATTACTACAAAACGATGGAAGCAAGAAAAAGTCTTTATTTTTTTGTTCTGGTTTAACATATTTTTATCAATTTGGTAT
GCTTTTTGGTTTTATAAAGGCTGGCTTCCATTAACAAAACGATTTCACATTTTAGATACATTTAATTTTGCACGTTATCA
TTTTTTGCGCCCGTTAGTTATTTATGTTCTATTCGCTCTTGGATTAAAAGTTTTATGGTTACAAGGGAAAGTATGGAGAC
ATGCTGCAACAAGTATTATAATAGCCCAAATTATTTTGTTATGCTTTTATAATGAAGAAATTGTTTATCAAAATAAACCT
TCAGTAAAAGAATTTTTTGCAGAAAAACAATTTAAGGAGATAAAAGAGTACATAGGTTTATCTGTGGAACAGTACCGTAT
CGCTAATATCGGTTTACATCCAGCTATCGCTCAGTACAATGGGTTCTATACACTTGACACATACAACAATTTTTATCCTC
TATCTTACAAATATGAATTCCGAAAAATAATTGAGAAGGAACTAGCGAAAAATAAAACGATTCGTACGTATTTTGACGAA
TGGGGTGGCCGTTGTTATATTTTCACCGATGAACTTGGAAAACACTATATGTTTAAGAAAAATTCGAAAAAACGGTTAAA
AAATGTAGAACTAAATATAGATCATTTTAAAAAAATGGGTGGTCGTTACATATTTTCTGCTATCCCTATTGAAAATGCAG
TAAAAAACAATTTATCCCTCGAGAAAATATTTATATCAAAGACATCCGCTTGGAAAATTTATTTATATAAAGCAATATAG

Upstream 100 bases:

>100_bases
TACCACTTAAATTTATAGCACCTTGATCAACCAGGGATAATTTCTTCCATTTTGGAAATTTTATAAGTAAACTTTTTGAG
AATCCTTTGAGGTGCGAACA

Downstream 100 bases:

>100_bases
ATAAGTACATTAGATTACATCTCTCGATATAAATTTATAAAAAATCAAACTAATATTTAACTGCAATATTAGTTTGGTTT
TTACTATTTGTATGAAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MFLNQNQKERKLFVFATIILILYLSPLFILGENAHIRIHDNLDSNLSWYKVLTCSGEIQGPINSTIPQVINNQLSRNAFN
TEFSGIVWLYAFFPNMVAYVLSQTITRVIAFIGMYVLLKHHFLPKEEWMVISIGVSLTFALTPFWPSGMLSTLGMPLALW
AFLNIRKGEKLWKNYFVLTLIPLYSSIVLGFFFFLSSIGILWLVDLVVKKEWNFRFLFSIIYMTLIYMIVEYRLVTSFFL
STAPNSRDEYFHARLSLWRSLRLTVKNFLLGHTHVMTVHTFVILPTILIALYFIITTKRWKQEKVFIFLFWFNIFLSIWY
AFWFYKGWLPLTKRFHILDTFNFARYHFLRPLVIYVLFALGLKVLWLQGKVWRHAATSIIIAQIILLCFYNEEIVYQNKP
SVKEFFAEKQFKEIKEYIGLSVEQYRIANIGLHPAIAQYNGFYTLDTYNNFYPLSYKYEFRKIIEKELAKNKTIRTYFDE
WGGRCYIFTDELGKHYMFKKNSKKRLKNVELNIDHFKKMGGRYIFSAIPIENAVKNNLSLEKIFISKTSAWKIYLYKAI

Sequences:

>Translated_559_residues
MFLNQNQKERKLFVFATIILILYLSPLFILGENAHIRIHDNLDSNLSWYKVLTCSGEIQGPINSTIPQVINNQLSRNAFN
TEFSGIVWLYAFFPNMVAYVLSQTITRVIAFIGMYVLLKHHFLPKEEWMVISIGVSLTFALTPFWPSGMLSTLGMPLALW
AFLNIRKGEKLWKNYFVLTLIPLYSSIVLGFFFFLSSIGILWLVDLVVKKEWNFRFLFSIIYMTLIYMIVEYRLVTSFFL
STAPNSRDEYFHARLSLWRSLRLTVKNFLLGHTHVMTVHTFVILPTILIALYFIITTKRWKQEKVFIFLFWFNIFLSIWY
AFWFYKGWLPLTKRFHILDTFNFARYHFLRPLVIYVLFALGLKVLWLQGKVWRHAATSIIIAQIILLCFYNEEIVYQNKP
SVKEFFAEKQFKEIKEYIGLSVEQYRIANIGLHPAIAQYNGFYTLDTYNNFYPLSYKYEFRKIIEKELAKNKTIRTYFDE
WGGRCYIFTDELGKHYMFKKNSKKRLKNVELNIDHFKKMGGRYIFSAIPIENAVKNNLSLEKIFISKTSAWKIYLYKAI
>Mature_559_residues
MFLNQNQKERKLFVFATIILILYLSPLFILGENAHIRIHDNLDSNLSWYKVLTCSGEIQGPINSTIPQVINNQLSRNAFN
TEFSGIVWLYAFFPNMVAYVLSQTITRVIAFIGMYVLLKHHFLPKEEWMVISIGVSLTFALTPFWPSGMLSTLGMPLALW
AFLNIRKGEKLWKNYFVLTLIPLYSSIVLGFFFFLSSIGILWLVDLVVKKEWNFRFLFSIIYMTLIYMIVEYRLVTSFFL
STAPNSRDEYFHARLSLWRSLRLTVKNFLLGHTHVMTVHTFVILPTILIALYFIITTKRWKQEKVFIFLFWFNIFLSIWY
AFWFYKGWLPLTKRFHILDTFNFARYHFLRPLVIYVLFALGLKVLWLQGKVWRHAATSIIIAQIILLCFYNEEIVYQNKP
SVKEFFAEKQFKEIKEYIGLSVEQYRIANIGLHPAIAQYNGFYTLDTYNNFYPLSYKYEFRKIIEKELAKNKTIRTYFDE
WGGRCYIFTDELGKHYMFKKNSKKRLKNVELNIDHFKKMGGRYIFSAIPIENAVKNNLSLEKIFISKTSAWKIYLYKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66363; Mature: 66363

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLNQNQKERKLFVFATIILILYLSPLFILGENAHIRIHDNLDSNLSWYKVLTCSGEIQG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCEEEEECCCCCCCCEEEEEEECCCCCC
PINSTIPQVINNQLSRNAFNTEFSGIVWLYAFFPNMVAYVLSQTITRVIAFIGMYVLLKH
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLPKEEWMVISIGVSLTFALTPFWPSGMLSTLGMPLALWAFLNIRKGEKLWKNYFVLTL
HCCCCCCEEEEEECCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
IPLYSSIVLGFFFFLSSIGILWLVDLVVKKEWNFRFLFSIIYMTLIYMIVEYRLVTSFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
STAPNSRDEYFHARLSLWRSLRLTVKNFLLGHTHVMTVHTFVILPTILIALYFIITTKRW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQEKVFIFLFWFNIFLSIWYAFWFYKGWLPLTKRFHILDTFNFARYHFLRPLVIYVLFAL
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
GLKVLWLQGKVWRHAATSIIIAQIILLCFYNEEIVYQNKPSVKEFFAEKQFKEIKEYIGL
HHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC
SVEQYRIANIGLHPAIAQYNGFYTLDTYNNFYPLSYKYEFRKIIEKELAKNKTIRTYFDE
CHHHEEEECCCCCCHHHHCCCEEEEECCCCEECCEEHHHHHHHHHHHHHCCCHHHHHHHH
WGGRCYIFTDELGKHYMFKKNSKKRLKNVELNIDHFKKMGGRYIFSAIPIENAVKNNLSL
HCCEEEEEECCCCCCCEECCCCHHHHHCCCCCHHHHHHCCCEEEEEECCHHHHHHCCCCE
EKIFISKTSAWKIYLYKAI
EEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MFLNQNQKERKLFVFATIILILYLSPLFILGENAHIRIHDNLDSNLSWYKVLTCSGEIQG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCEEEEECCCCCCCCEEEEEEECCCCCC
PINSTIPQVINNQLSRNAFNTEFSGIVWLYAFFPNMVAYVLSQTITRVIAFIGMYVLLKH
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLPKEEWMVISIGVSLTFALTPFWPSGMLSTLGMPLALWAFLNIRKGEKLWKNYFVLTL
HCCCCCCEEEEEECCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
IPLYSSIVLGFFFFLSSIGILWLVDLVVKKEWNFRFLFSIIYMTLIYMIVEYRLVTSFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
STAPNSRDEYFHARLSLWRSLRLTVKNFLLGHTHVMTVHTFVILPTILIALYFIITTKRW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQEKVFIFLFWFNIFLSIWYAFWFYKGWLPLTKRFHILDTFNFARYHFLRPLVIYVLFAL
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
GLKVLWLQGKVWRHAATSIIIAQIILLCFYNEEIVYQNKPSVKEFFAEKQFKEIKEYIGL
HHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC
SVEQYRIANIGLHPAIAQYNGFYTLDTYNNFYPLSYKYEFRKIIEKELAKNKTIRTYFDE
CHHHEEEECCCCCCHHHHCCCEEEEECCCCEECCEEHHHHHHHHHHHHHCCCHHHHHHHH
WGGRCYIFTDELGKHYMFKKNSKKRLKNVELNIDHFKKMGGRYIFSAIPIENAVKNNLSL
HCCEEEEEECCCCCCCEECCCCHHHHHCCCCCHHHHHHCCCEEEEEECCHHHHHHCCCCE
EKIFISKTSAWKIYLYKAI
EEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]