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The map label for this gene is prlC [C]

Identifier: 218903712

GI number: 218903712

Start: 2469257

End: 2470948

Strand: Reverse

Name: prlC [C]

Synonym: BCAH820_2596

Alternate gene names: 218903712

Gene position: 2470948-2469257 (Counterclockwise)

Preceding gene: 218903717

Following gene: 218903710

Centisome position: 46.6

GC content: 30.44

Gene sequence:

>1692_bases
ATGCAACGTGTAAATACGATTGATATTAGTAATGTACTACAATTGGAAAAAACTCTTTCGACTTTATTAAATAAAAGGAT
TTCTTCAAAACTAGACCTTGAAAACTGGTTAAAAGAGCAGTCAAAAATGATTTGGGAAATTGAAGAACAATTAAGATCAC
ATTATATCGCCTTTCAATGTAATACGGATGATGAAGAAATAAAAGGTACTTTTGAATATGATCAACAATTTGTAAAGCCA
CTTTTAAAGCGGTACCAAAATTTATTGGATAATAAATATTTAAAGTCACCTTTTCGAATGGAATTAGATTCTAACGTATA
TGGTTTGTTGGATGCAAAAATAAAAAATGCTCAAAAGTTATTTTGTGATGAAAATATTGAATTAGAAATAAAGGAAGACA
AATTAGTCACAGAGTACTTTGAAATCACTGGAGGATTAATTGGAATTTGGGACGGAGAAGAAAAAACGATAACAGAATTA
CAATCCTACTTACAAGATTCGAATCGTGACACCCGTAAAAAGGCAAAAGCCATTATTTCTGAACAATTTTTATCTGTTGA
AAAAGAACTCCAAAACATATTAAATCAATTAATTGAAATTCGCCATCAAAAAGCAAATAATATTCAACTAGAAAATTATC
GTGATTATATGTTCAAGAAATACGAGCGTTTTGATTATTCAGCGAAAGATTGCTATGAACTAGCTGAATCCATACGTAAG
TATGTTGTGCCTCTTAAAGATAAAATATTACTAGAGAAAAAAGAGAAACTGCAAGTGGATACGCTTCGCCCGTGGGATGT
ATCAGCTGTAACTCCAGATCAAAAAGTACTTAAACCAATTGCAAATGAAAATGATTTAATAGAAAAGAGCACTCATATCT
TTAATAAACTAGATGTTGAATTTTCAACACTATTAAACCGAATGTATAAACACGATTGTCTTGATTTAACAAGCCGCAAA
GGAAAAGCAGCTGGAGGCTTTTGTGAGTACTTACCAGCTTCACAATTATCTTATATTTTTATGAACTTAAATTATACACA
AGATGATATTATCACTTTTATACATGAAATGGGTCATAGTATTCATAACGAACTTATAAAACCATTAAAATTACGACAGT
ATATAGAAATTCCAGCTGAAACAGCTGAACTAGCCAGTATGACAATGGAATTATTCTCGCTTAATTATTGGGATACCTTC
TATACAAACAAAAAAGATTTAAAACAAGCAAAAATCAACTACTTTAAAGATGTTATTTCATATTTACCTGTTATGCTTAT
TGTCGATCAATTTCAACACTGGCTGTATGAGAATCCAACTCATACTTCTGAAGAAAGAAATGAAAAATACTTACAACTTC
AAAAACATTATCAGTCTAACGTCATACATATTGATGGCTACGAAAACTGGATAGCAACGAGTTGGTTACCTGTACTCCAT
ATTTTTGAAGTACCATTTTATTATATTGAATATGCAATCGCCCAACTTGGTGCAGTACAAATGTATAAACAATATAAAGA
GGATCCTAAGCAAGCACTAGAAAATTATAAAAAGGCATTATCACTAGGAAGCTCGCAATCTATAAAAGAAGTGTATGAAG
CAGCCGGTATTCGTTTTGATTTTTCTGGCGAAACAATTAAAGAATTAATGCTATTTGTAGAAAAAGAATTAGAATTACTT
GAGCAATTATAA

Upstream 100 bases:

>100_bases
TTTAAATTTAACATTATTTCACATTTCCTCCTCTTAAAAAGGAAATTACAATTAATAAGTAGAATATTTTCATGAATAAA
TAAAAAGTGAGGGATATATA

Downstream 100 bases:

>100_bases
GAAGAAAACTATACCTATATTTTAGGTGTAGCTTTCTTCTTTATTTTATTAATCAGCTCTATGTACTGAGTATCTCCATA
TCCGATTGTTGGAAAAAGAT

Product: hypothetical protein

Products: hydrolyzed oligopeptide [C]

Alternate protein names: Oligoendopeptidase M3 Family; PepF/M3 Family Oligoendopeptidase; M3 Family Oligoendopeptidase; Oligoendopeptidase PepF/M3 Family; Peptidase M3A And M3B Thimet/Oligopeptidase F; Oligoendopeptidase; Oligoendopeptidase PepF; Oligoendopeptidase F Protein; Peptidase M3 Family Protein; Oligopeptidase F; Oligoendopeptidase Pepf/M3 Family; Oligopeptidase; Oligoendopeptidase M3 Family Protein; Truncated Oligoendopeptidase F; M3 Family Peptidase; Peptidase; Peptidase M3 Oligoendopeptidase F; M3B Family Peptidase; Exported Peptidase

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MQRVNTIDISNVLQLEKTLSTLLNKRISSKLDLENWLKEQSKMIWEIEEQLRSHYIAFQCNTDDEEIKGTFEYDQQFVKP
LLKRYQNLLDNKYLKSPFRMELDSNVYGLLDAKIKNAQKLFCDENIELEIKEDKLVTEYFEITGGLIGIWDGEEKTITEL
QSYLQDSNRDTRKKAKAIISEQFLSVEKELQNILNQLIEIRHQKANNIQLENYRDYMFKKYERFDYSAKDCYELAESIRK
YVVPLKDKILLEKKEKLQVDTLRPWDVSAVTPDQKVLKPIANENDLIEKSTHIFNKLDVEFSTLLNRMYKHDCLDLTSRK
GKAAGGFCEYLPASQLSYIFMNLNYTQDDIITFIHEMGHSIHNELIKPLKLRQYIEIPAETAELASMTMELFSLNYWDTF
YTNKKDLKQAKINYFKDVISYLPVMLIVDQFQHWLYENPTHTSEERNEKYLQLQKHYQSNVIHIDGYENWIATSWLPVLH
IFEVPFYYIEYAIAQLGAVQMYKQYKEDPKQALENYKKALSLGSSQSIKEVYEAAGIRFDFSGETIKELMLFVEKELELL
EQL

Sequences:

>Translated_563_residues
MQRVNTIDISNVLQLEKTLSTLLNKRISSKLDLENWLKEQSKMIWEIEEQLRSHYIAFQCNTDDEEIKGTFEYDQQFVKP
LLKRYQNLLDNKYLKSPFRMELDSNVYGLLDAKIKNAQKLFCDENIELEIKEDKLVTEYFEITGGLIGIWDGEEKTITEL
QSYLQDSNRDTRKKAKAIISEQFLSVEKELQNILNQLIEIRHQKANNIQLENYRDYMFKKYERFDYSAKDCYELAESIRK
YVVPLKDKILLEKKEKLQVDTLRPWDVSAVTPDQKVLKPIANENDLIEKSTHIFNKLDVEFSTLLNRMYKHDCLDLTSRK
GKAAGGFCEYLPASQLSYIFMNLNYTQDDIITFIHEMGHSIHNELIKPLKLRQYIEIPAETAELASMTMELFSLNYWDTF
YTNKKDLKQAKINYFKDVISYLPVMLIVDQFQHWLYENPTHTSEERNEKYLQLQKHYQSNVIHIDGYENWIATSWLPVLH
IFEVPFYYIEYAIAQLGAVQMYKQYKEDPKQALENYKKALSLGSSQSIKEVYEAAGIRFDFSGETIKELMLFVEKELELL
EQL
>Mature_563_residues
MQRVNTIDISNVLQLEKTLSTLLNKRISSKLDLENWLKEQSKMIWEIEEQLRSHYIAFQCNTDDEEIKGTFEYDQQFVKP
LLKRYQNLLDNKYLKSPFRMELDSNVYGLLDAKIKNAQKLFCDENIELEIKEDKLVTEYFEITGGLIGIWDGEEKTITEL
QSYLQDSNRDTRKKAKAIISEQFLSVEKELQNILNQLIEIRHQKANNIQLENYRDYMFKKYERFDYSAKDCYELAESIRK
YVVPLKDKILLEKKEKLQVDTLRPWDVSAVTPDQKVLKPIANENDLIEKSTHIFNKLDVEFSTLLNRMYKHDCLDLTSRK
GKAAGGFCEYLPASQLSYIFMNLNYTQDDIITFIHEMGHSIHNELIKPLKLRQYIEIPAETAELASMTMELFSLNYWDTF
YTNKKDLKQAKINYFKDVISYLPVMLIVDQFQHWLYENPTHTSEERNEKYLQLQKHYQSNVIHIDGYENWIATSWLPVLH
IFEVPFYYIEYAIAQLGAVQMYKQYKEDPKQALENYKKALSLGSSQSIKEVYEAAGIRFDFSGETIKELMLFVEKELELL
EQL

Specific function: May Play A Specific Role In The Degradation Of Signal Peptides After They Are Released From Precursor Forms Of Secreted Proteins. Can Cleave N-Acetyl-L-Ala(4). [C]

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.70 [C]

Molecular weight: Translated: 66659; Mature: 66659

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVNTIDISNVLQLEKTLSTLLNKRISSKLDLENWLKEQSKMIWEIEEQLRSHYIAFQC
CCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDDEEIKGTFEYDQQFVKPLLKRYQNLLDNKYLKSPFRMELDSNVYGLLDAKIKNAQKL
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH
FCDENIELEIKEDKLVTEYFEITGGLIGIWDGEEKTITELQSYLQDSNRDTRKKAKAIIS
HCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
EQFLSVEKELQNILNQLIEIRHQKANNIQLENYRDYMFKKYERFDYSAKDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YVVPLKDKILLEKKEKLQVDTLRPWDVSAVTPDQKVLKPIANENDLIEKSTHIFNKLDVE
HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCHH
FSTLLNRMYKHDCLDLTSRKGKAAGGFCEYLPASQLSYIFMNLNYTQDDIITFIHEMGHS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHH
IHNELIKPLKLRQYIEIPAETAELASMTMELFSLNYWDTFYTNKKDLKQAKINYFKDVIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHH
YLPVMLIVDQFQHWLYENPTHTSEERNEKYLQLQKHYQSNVIHIDGYENWIATSWLPVLH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
IFEVPFYYIEYAIAQLGAVQMYKQYKEDPKQALENYKKALSLGSSQSIKEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEE
FSGETIKELMLFVEKELELLEQL
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRVNTIDISNVLQLEKTLSTLLNKRISSKLDLENWLKEQSKMIWEIEEQLRSHYIAFQC
CCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDDEEIKGTFEYDQQFVKPLLKRYQNLLDNKYLKSPFRMELDSNVYGLLDAKIKNAQKL
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHH
FCDENIELEIKEDKLVTEYFEITGGLIGIWDGEEKTITELQSYLQDSNRDTRKKAKAIIS
HCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
EQFLSVEKELQNILNQLIEIRHQKANNIQLENYRDYMFKKYERFDYSAKDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YVVPLKDKILLEKKEKLQVDTLRPWDVSAVTPDQKVLKPIANENDLIEKSTHIFNKLDVE
HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCHH
FSTLLNRMYKHDCLDLTSRKGKAAGGFCEYLPASQLSYIFMNLNYTQDDIITFIHEMGHS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHH
IHNELIKPLKLRQYIEIPAETAELASMTMELFSLNYWDTFYTNKKDLKQAKINYFKDVIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHH
YLPVMLIVDQFQHWLYENPTHTSEERNEKYLQLQKHYQSNVIHIDGYENWIATSWLPVLH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
IFEVPFYYIEYAIAQLGAVQMYKQYKEDPKQALENYKKALSLGSSQSIKEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEE
FSGETIKELMLFVEKELELLEQL
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Co2+; Mn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Oligopeptide; H2O [C]

Specific reaction: Oligopeptide + H2O = Hydrolyzed oligopeptide [C]

General reaction: Hydrolysis of peptide bond [C]

Inhibitor: Cu2+; EDTA; Ni2+; Zn2+ [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA