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The map label for this gene is yxdM [H]

Identifier: 218903524

GI number: 218903524

Start: 2292506

End: 2294056

Strand: Direct

Name: yxdM [H]

Synonym: BCAH820_2408

Alternate gene names: 218903524

Gene position: 2292506-2294056 (Clockwise)

Preceding gene: 218903523

Following gene: 218903525

Centisome position: 43.23

GC content: 33.2

Gene sequence:

>1551_bases
ATGGGTATTGTTAGTATTATTATCGGGATTTTAGTAGGGATGTTACTTGCAAGTGTAGCAGGGAACTTTTTAATGAATGG
TATGGAAATTTCAGCAAAAGGTAGTTATTCATCTGTATATACACCAGCAATCTTAGTTACAGCTATTTTCTTCGTAATAC
TATTTTTTATTACAGGTTTAATGAATAGCATCCGTTTATTACGCAAAACAGAATTAGAGTTAATACGTGAAGATGAAACA
CTAGATGAAGTGAAGAAAAGTAAAACTCGCATTATTATAATGACCGTACTTGGTGTATTACTAGTAAGTATCGGATACTA
TTTTATGATCAATGTAAAAGTATATGCTGAATTAGGTTTTATAATAGCGACAATCGTTACAACACTTGGAACATATTTTA
TCTTTAGTTCATTGCTCCCATTTTTTGTGATGAAAATTAAAGGGAATAAAAAACGTAATGAAACGGGCTTAAATAGTTTT
ACATATGCACAGCTACGCTTTCGAGTAAATAGTTTATCGAGAGTATTAGGTACTGTAGCGATGTTAATTGCATTAGGCGC
AGGTGCGATGACAGCAGGTATGGCGTTCCATAAAAATGTAGGTATTATGACAGACTTCTCACGTGTGTATGATGTCGTAA
TTCATGATCCAAATGAACAAGATACAGCTGCATTAAAAGAAATGGAAATTGTTGAAGAAAGCCAGTACAAATATAAAGTA
GATGGAGAAGCGGTTTATTACTTACGTAATGATTTAACTGCGAAACCGCCACTTGTTTCAGACCACTTTGATACAAAAAC
TTTAAAAGAGCCTGTTCGTAAACGTGTAACTGAACCTTTAACTGAACCTGTATATTCTGCTTTAGAGGCTCCTGAATTAG
CAAAATTCCCTCGTATGCCGAAAGATTGGGAAGATGCAATTGTAAGAGAAATACAAATTACACATAATCAATTTAACGGA
AAACCTGTAAGAATTGCAGATGAAGCGCATTATAAAGGAATTCAAGGAACAGAACACACTGTAACATTAGCAAAAGTAGA
TGATATGAAAAAATATAAACCGTTGTTGATCGAAATAGATAAGAGACAAAAAGAACAAATTGAAAAAACAACAGGTACAA
AAGTAGACTTATTTACGAAAATGACAATTTATCAGTTTATGAACAGTTTCATGAGCGGAACAATGTTTATGGGATTTTTC
CTCGGAATTGCCTTTTTAGCGATGATGGCAAGTTCACTAATGTTCAAAATATTAACAGGTGCTTCTCGTGATGTACGCCG
TTATGAAATATTACGAAAAATCGGTGTGAGACGTAGTATGTTAACAAAAAGTATATATAAAGAAATTTCATATTTATTTA
TCTTCCCAGCGATTATTGGAATTTCCCACGTGTTAGTAGGGTTAAACTTATTTAGCTTCATATTAGTTGACCCGTTTGTA
AAAGTGTGGGTGCCAATTGGGATATTCTTAGTCATTTATTTTATCTATTACTGGATAACTGTCCAATTGTATAAAGGTAT
GGTAATGCCGAAAGAAGAGGTAGCAAAATAG

Upstream 100 bases:

>100_bases
CTTTCTTACTCACATTAAGAAGAAAAGAACTCGGTATGTACATGATGCTCGGAGCGAAAAAGAAAAAGTAGCACAGTTAT
TATTTATTGAAACATTCGGT

Downstream 100 bases:

>100_bases
ATTAATAAAAAAGTCCTTGTTTTGAAAACAAGGACTTTTTTATTTGTAATACATTGTAATCAAGTTTTTCCATAGTTAAT
GCATTGAAAATTAAGAAAAT

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MGIVSIIIGILVGMLLASVAGNFLMNGMEISAKGSYSSVYTPAILVTAIFFVILFFITGLMNSIRLLRKTELELIREDET
LDEVKKSKTRIIIMTVLGVLLVSIGYYFMINVKVYAELGFIIATIVTTLGTYFIFSSLLPFFVMKIKGNKKRNETGLNSF
TYAQLRFRVNSLSRVLGTVAMLIALGAGAMTAGMAFHKNVGIMTDFSRVYDVVIHDPNEQDTAALKEMEIVEESQYKYKV
DGEAVYYLRNDLTAKPPLVSDHFDTKTLKEPVRKRVTEPLTEPVYSALEAPELAKFPRMPKDWEDAIVREIQITHNQFNG
KPVRIADEAHYKGIQGTEHTVTLAKVDDMKKYKPLLIEIDKRQKEQIEKTTGTKVDLFTKMTIYQFMNSFMSGTMFMGFF
LGIAFLAMMASSLMFKILTGASRDVRRYEILRKIGVRRSMLTKSIYKEISYLFIFPAIIGISHVLVGLNLFSFILVDPFV
KVWVPIGIFLVIYFIYYWITVQLYKGMVMPKEEVAK

Sequences:

>Translated_516_residues
MGIVSIIIGILVGMLLASVAGNFLMNGMEISAKGSYSSVYTPAILVTAIFFVILFFITGLMNSIRLLRKTELELIREDET
LDEVKKSKTRIIIMTVLGVLLVSIGYYFMINVKVYAELGFIIATIVTTLGTYFIFSSLLPFFVMKIKGNKKRNETGLNSF
TYAQLRFRVNSLSRVLGTVAMLIALGAGAMTAGMAFHKNVGIMTDFSRVYDVVIHDPNEQDTAALKEMEIVEESQYKYKV
DGEAVYYLRNDLTAKPPLVSDHFDTKTLKEPVRKRVTEPLTEPVYSALEAPELAKFPRMPKDWEDAIVREIQITHNQFNG
KPVRIADEAHYKGIQGTEHTVTLAKVDDMKKYKPLLIEIDKRQKEQIEKTTGTKVDLFTKMTIYQFMNSFMSGTMFMGFF
LGIAFLAMMASSLMFKILTGASRDVRRYEILRKIGVRRSMLTKSIYKEISYLFIFPAIIGISHVLVGLNLFSFILVDPFV
KVWVPIGIFLVIYFIYYWITVQLYKGMVMPKEEVAK
>Mature_515_residues
GIVSIIIGILVGMLLASVAGNFLMNGMEISAKGSYSSVYTPAILVTAIFFVILFFITGLMNSIRLLRKTELELIREDETL
DEVKKSKTRIIIMTVLGVLLVSIGYYFMINVKVYAELGFIIATIVTTLGTYFIFSSLLPFFVMKIKGNKKRNETGLNSFT
YAQLRFRVNSLSRVLGTVAMLIALGAGAMTAGMAFHKNVGIMTDFSRVYDVVIHDPNEQDTAALKEMEIVEESQYKYKVD
GEAVYYLRNDLTAKPPLVSDHFDTKTLKEPVRKRVTEPLTEPVYSALEAPELAKFPRMPKDWEDAIVREIQITHNQFNGK
PVRIADEAHYKGIQGTEHTVTLAKVDDMKKYKPLLIEIDKRQKEQIEKTTGTKVDLFTKMTIYQFMNSFMSGTMFMGFFL
GIAFLAMMASSLMFKILTGASRDVRRYEILRKIGVRRSMLTKSIYKEISYLFIFPAIIGISHVLVGLNLFSFILVDPFVK
VWVPIGIFLVIYFIYYWITVQLYKGMVMPKEEVAK

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 58593; Mature: 58462

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVSIIIGILVGMLLASVAGNFLMNGMEISAKGSYSSVYTPAILVTAIFFVILFFITGL
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MNSIRLLRKTELELIREDETLDEVKKSKTRIIIMTVLGVLLVSIGYYFMINVKVYAELGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
IIATIVTTLGTYFIFSSLLPFFVMKIKGNKKRNETGLNSFTYAQLRFRVNSLSRVLGTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MLIALGAGAMTAGMAFHKNVGIMTDFSRVYDVVIHDPNEQDTAALKEMEIVEESQYKYKV
HHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEE
DGEAVYYLRNDLTAKPPLVSDHFDTKTLKEPVRKRVTEPLTEPVYSALEAPELAKFPRMP
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
KDWEDAIVREIQITHNQFNGKPVRIADEAHYKGIQGTEHTVTLAKVDDMKKYKPLLIEID
CCHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCCCCCCCEEEEEEHHHHHHCCCCEEEEC
KRQKEQIEKTTGTKVDLFTKMTIYQFMNSFMSGTMFMGFFLGIAFLAMMASSLMFKILTG
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASRDVRRYEILRKIGVRRSMLTKSIYKEISYLFIFPAIIGISHVLVGLNLFSFILVDPFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVWVPIGIFLVIYFIYYWITVQLYKGMVMPKEEVAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
GIVSIIIGILVGMLLASVAGNFLMNGMEISAKGSYSSVYTPAILVTAIFFVILFFITGL
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MNSIRLLRKTELELIREDETLDEVKKSKTRIIIMTVLGVLLVSIGYYFMINVKVYAELGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
IIATIVTTLGTYFIFSSLLPFFVMKIKGNKKRNETGLNSFTYAQLRFRVNSLSRVLGTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MLIALGAGAMTAGMAFHKNVGIMTDFSRVYDVVIHDPNEQDTAALKEMEIVEESQYKYKV
HHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEE
DGEAVYYLRNDLTAKPPLVSDHFDTKTLKEPVRKRVTEPLTEPVYSALEAPELAKFPRMP
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
KDWEDAIVREIQITHNQFNGKPVRIADEAHYKGIQGTEHTVTLAKVDDMKKYKPLLIEID
CCHHHHHHHHHHHHHCCCCCCCEEEECHHHCCCCCCCCCEEEEEEHHHHHHCCCCEEEEC
KRQKEQIEKTTGTKVDLFTKMTIYQFMNSFMSGTMFMGFFLGIAFLAMMASSLMFKILTG
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASRDVRRYEILRKIGVRRSMLTKSIYKEISYLFIFPAIIGISHVLVGLNLFSFILVDPFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVWVPIGIFLVIYFIYYWITVQLYKGMVMPKEEVAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]