Click here to switch to the map view.

The map label for this gene is 218903523

Identifier: 218903523

GI number: 218903523

Start: 2292177

End: 2292476

Strand: Direct

Name: 218903523

Synonym: BCAH820_2407

Alternate gene names: NA

Gene position: 2292177-2292476 (Clockwise)

Preceding gene: 218903522

Following gene: 218903524

Centisome position: 43.23

GC content: 29.67

Gene sequence:

>300_bases
ATGTTATTCAAATTATCACGTCATAGTATGAAAAAGATGTTAAAAGATTATATGGTTTTACTTATCGGTCTCGTTATTAG
TATTAGTATTTTTTACATGTTCCAAACGATGGCGATGAATAGTGAATTTACGAAGGATAATAGTCTTATTAGTAGTATTA
GACTCGTATTCTGGGTAGGTGCAATACTATTATCTTTCATAACTGTATTTTATATTATATATGCCAATTCTTTCTTACTC
ACATTAAGAAGAAAAGAACTCGGTATGTACATGATGCTCGGAGCGAAAAAGAAAAAGTAG

Upstream 100 bases:

>100_bases
AATTAAAGCGTCAAGGAACGCGAGAAAGTTTCTATCAAGACATTTTAGGTGTGCTCGCTCATATGGGCTCAGCTGCTGAG
TCTAAGTAGGGGGCGAGACA

Downstream 100 bases:

>100_bases
CACAGTTATTATTTATTGAAACATTCGGTATGGGTATTGTTAGTATTATTATCGGGATTTTAGTAGGGATGTTACTTGCA
AGTGTAGCAGGGAACTTTTT

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; ABC Transporter; ABC Transporter Permease; ABC Transporter Permease Component; Permease; Peptide ABC Transporter Permease/Transmembrane Protein; ABC-Type Antimicrobial Peptide Transport System Protein

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MLFKLSRHSMKKMLKDYMVLLIGLVISISIFYMFQTMAMNSEFTKDNSLISSIRLVFWVGAILLSFITVFYIIYANSFLL
TLRRKELGMYMMLGAKKKK

Sequences:

>Translated_99_residues
MLFKLSRHSMKKMLKDYMVLLIGLVISISIFYMFQTMAMNSEFTKDNSLISSIRLVFWVGAILLSFITVFYIIYANSFLL
TLRRKELGMYMMLGAKKKK
>Mature_99_residues
MLFKLSRHSMKKMLKDYMVLLIGLVISISIFYMFQTMAMNSEFTKDNSLISSIRLVFWVGAILLSFITVFYIIYANSFLL
TLRRKELGMYMMLGAKKKK

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11625; Mature: 11625

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.1 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKLSRHSMKKMLKDYMVLLIGLVISISIFYMFQTMAMNSEFTKDNSLISSIRLVFWVG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AILLSFITVFYIIYANSFLLTLRRKELGMYMMLGAKKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLFKLSRHSMKKMLKDYMVLLIGLVISISIFYMFQTMAMNSEFTKDNSLISSIRLVFWVG
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AILLSFITVFYIIYANSFLLTLRRKELGMYMMLGAKKKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA