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The map label for this gene is dppE [H]

Identifier: 218902990

GI number: 218902990

Start: 1772222

End: 1773862

Strand: Reverse

Name: dppE [H]

Synonym: BCAH820_1873

Alternate gene names: 218902990

Gene position: 1773862-1772222 (Counterclockwise)

Preceding gene: 218902995

Following gene: 218902987

Centisome position: 33.45

GC content: 35.04

Gene sequence:

>1641_bases
ATGAAGAAAAAGACGCCAGGAATCGTTGCACTCTCAATCACATTATCTATGTTTTTAACAGCATGTGGCCAAAAACAAGA
GTCAACAACTACCGGAGAAAAGAAAAAAGAATCTTCAAAACAAGTATTAAACATTGTAGAAGCTGGGGAAATTTCTACAC
TTGATTCATCTATCGCAACTGATGGGTTTTCTTATGCTGCATTAAACAACGTAATGGAAGGATTATATATGCCTGGTCCT
GACAATAAACCTGTTCCTGCAGCTGCTGAATCATACAAACTGAGCGAAGACGGAAAAACATATACATTTACATTACACGA
TTCAAAATGGTCAAATGGCGATCCAGTAACTGCTCATGATTTTGAATATGCATGGAAACGTGCCGTTAATCCAGAAACTG
CTTCTGAATACGCACATATTATGTTCGATATTAAAAACGCTGAAAAAATAAATAAAAAAGAATTACCAATTGATTCATTT
GGTGTAAAGGCAATTGATGATAGAACACTTGAAGTACAATTAGAACACCCTGTTCCATACTTTTTAGGGTTAATGGGATT
TGCAACATTTTATCCTCAAAACCAAAAGGTAGTAGAAGCACAAGGGAAAAATTACGGGCTTGAAGCTGCAAATGTAGTTT
ATAACGGGCCATTTCAATTAAGTGAATGGAAACATGATACAAGTTACAAAATGACGAAAAACCCGAACTACTGGGATAAT
AAAAATGTGAAGTTAAATGAAATTAATGTAAATATCGTAAAAGATACTTCAACAGCCGTTAATTTATTTGAAAGCAAACA
AGTAGACCGAATTACGATCAATTCAGAGTTTGTTGATAAATATCAAAAAGATCCGAGCTTAAAGAAAATGGAACGTCCTT
CTATGACGTTTTTCCGATTTAGCCAAAAAAATCCTTTATTAGCAAACAAAAACGCTCGAAAAGCTATTTCGCTTGCTTTT
GATAAACAAGGAATCGCAACAACGATTTTAAACAATGGTTCTATACCTGCGAATGCATTCGTTCCGAAAGGATTCGTAAA
AGGACCTGACAATAAAGATTTTCGCAGTACAAGTAATGTAAAAGTAGAAACAAATGTGAAAGAAGCTAAAACACTATGGG
AAACTGCGAAAAAAGAAACAAACTTACAAAACGCTTCCCTTTCAATCATAACAACTGATGAATCTAACGATAAAAAAATT
AGCGAGTTTTTAAAAGGTGAACTGGAGAAAAACTTACCTGGATTAAAAATCACTTTACAGCCCCTTCCAGTAAAAGCATT
TTTAGATCGCGAAGGAAATGGCGATTTTGAAATTTCACTTTCTACTTGGGGACCAGATTATCCTGACCCTACAACATTTT
TAAATATGTTCGTCACAGACGGACCGTTTAATAAGATGAGCTATTCAAACAAACAATACGACGAATTAATTGAGAAAACG
AGCTCTACCTTAGCAACTGATTTATCCGCACGTTGGAAAGCGTTTCAAGATGCAGAGAAAATCTTACTGGAAGATGATGC
AGCTATCGCTCCAATCTTCCAATCAGGGCTTGTATATTTAGAACGCACAACAGTAAAAGGTGTTGTTATTCGTCCATTTG
CAGGAATTTATTCTTATAAGTGGGCCTCTATTACAGAATAA

Upstream 100 bases:

>100_bases
ACATAAGATATTTTTTCTATACGTTTTATCGGATTTATTTATAGAAATTTTCTATATTTTCTTTTATACTAAGGCAGAGA
TGAAGGGAAGGATGACAACT

Downstream 100 bases:

>100_bases
GAAAAAGGCGATCCTAACATATATTAGGATCGTCTTTTTTATTAAATCGCAAAACGCTTATACTTTTCGTAATCACTCGT
CTTACATTCTACTTCTATTT

Product: putative oligopeptide ABC transporter, oligopeptide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKKKTPGIVALSITLSMFLTACGQKQESTTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDRTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSMTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSNVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLATDLSARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERTTVKGVVIRPFAGIYSYKWASITE

Sequences:

>Translated_546_residues
MKKKTPGIVALSITLSMFLTACGQKQESTTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDRTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSMTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSNVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLATDLSARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERTTVKGVVIRPFAGIYSYKWASITE
>Mature_546_residues
MKKKTPGIVALSITLSMFLTACGQKQESTTTGEKKKESSKQVLNIVEAGEISTLDSSIATDGFSYAALNNVMEGLYMPGP
DNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSF
GVKAIDDRTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSMTFFRFSQKNPLLANKNARKAISLAF
DKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSNVKVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKI
SEFLKGELEKNLPGLKITLQPLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
SSTLATDLSARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERTTVKGVVIRPFAGIYSYKWASITE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=499, Percent_Identity=29.0581162324649, Blast_Score=204, Evalue=8e-54,
Organism=Escherichia coli, GI1787495, Length=520, Percent_Identity=28.4615384615385, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI87081878, Length=538, Percent_Identity=27.8810408921933, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1787762, Length=456, Percent_Identity=26.0964912280702, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1789966, Length=469, Percent_Identity=23.0277185501066, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787052, Length=551, Percent_Identity=23.049001814882, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787551, Length=528, Percent_Identity=22.1590909090909, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789887, Length=512, Percent_Identity=24.8046875, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61128; Mature: 61128

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTPGIVALSITLSMFLTACGQKQESTTTGEKKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDDRTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSMTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCCEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSNV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
PLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLATDLSARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERTTVKGVVIRPFAGIYSYK
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEEEEEECEEEEECCCCHHEEC
WASITE
CCCCCC
>Mature Secondary Structure
MKKKTPGIVALSITLSMFLTACGQKQESTTTGEKKKESSKQVLNIVEAGEISTLDSSIAT
CCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
DGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCCCCCEECC
FEYAWKRAVNPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDDRTLEVQLEHPVPY
HHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEEECCCCHH
FLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTKNPNYWDN
HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECCCCCCCCC
KNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSMTFFRF
CCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCCCCEEEEE
SQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSNV
CCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
KVETNVKEAKTLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLPGLKITLQ
EEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
PLPVKAFLDREGNGDFEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQYDELIEKT
CCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
SSTLATDLSARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERTTVKGVVIRPFAGIYSYK
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEEEEEECEEEEECCCCHHEEC
WASITE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]