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The map label for this gene is yebA [H]

Identifier: 218901919

GI number: 218901919

Start: 764758

End: 765918

Strand: Reverse

Name: yebA [H]

Synonym: BCAH820_0801

Alternate gene names: 218901919

Gene position: 765918-764758 (Counterclockwise)

Preceding gene: 218901937

Following gene: 218901918

Centisome position: 14.44

GC content: 36.43

Gene sequence:

>1161_bases
ATGAATATGAAAGCTACTGCTTTAACAGCAACTACTGTCGCAATTGCTTCTTTACTTCCTTCTATGGGAGAAACAAATGT
ACAAACAGCCAACGCTGAACAATTATCTAATGTGAAAACTGGATATGTCAAAGTCGATCAAGTAGCCTTACATACAAAAG
ATAACGCAAATAGCTCATCAATTGATACAATTCGCTTTAATACGAAAGTGAATATACTTGAAACAACTAATGGCTGGTAT
AAAGTATCTGTTAATAATAAAGTAGGTTACGTACAAAAAGATTCTATTCTACTAAAAAACAAACTTCAATCTAATAATCA
ATATATCGTCAATGCCAATGCATTAAACGTTCGTTCTGAACCTAATTTAGAATCTTCAATTTTAGATGTATTACCAAATG
GGAAATTCGTTACCATTCAAGAAGAACAAGGCGAGTGGTATAAAATTTCACATAATGGCAAAGCAGGTTACGTACAAAAA
GCATTCGTATCCCATGGTTCACAGCCTTTAGTAAAAGGCATCACAGTTCAAAATAATACGAAATACACAGTTGCAACACC
TAAACTTAACGTACGTAGCAACGCTAGTACAAGTAGCGCACTACTTGGTTCATTACAAAATGGTACACAATTACAAGTAG
TGGAAACTGTAGGAACTTGGTATAAAATTCGTTTTGGCACAGGATACGGATATGTGGCAAAGCATTATGTGGTGCAAAAT
CAAACACAATCACAAACTCAAACAGCTCAACCTACTTCCATTCCAGCAGTTTTCAAATTCCCTACTCAAGGAAGAATTAG
CTCAACCTTTGATATGCGCTGGGAACAAATGCATTATGGTATAGATATCGCAGCTCCAGGTAATGTCTCTATCCAGGCAG
CGGCTGCAGGTAAAGTCGTGAAATCATATTATTCAGCTAGCTATGGTAATGTTGTGTTCATCGCCCATCAAATAAACGGG
AAATTATATACAACAGTCTATGCTCACATGAAAGATCGCACTGTACAAGCTGGTGATCAAGTACAAGCTGGACAATTAGT
AGGTCATATGGGAAACACAGGTCATTCATACGGGCAACATCTTCATTTTGAATTGCACAATGGAGAATGGAATTTTGAAA
AGACAAATGCAGTAAACCCACTGCCATATTTAGTTAGGTAA

Upstream 100 bases:

>100_bases
ATATTGATTTCATATTACATTTATGTGAATACACCCACTATATTATATCTTTATACTATAATAAAATTACAACTATACAA
CTAGAGGAGGTCTCTATTAT

Downstream 100 bases:

>100_bases
ATTGTATGCCACGCAATATACCTCTCTTAATTGAATACTTAGCCTTTTTAGGCTTAATCTGTTGTTTAATCATTTACAAT
ACAAATACTTTATTTTTATC

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQK
AFVSHGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Sequences:

>Translated_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQK
AFVSHGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR
>Mature_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQK
AFVSHGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAPGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=133, Percent_Identity=36.8421052631579, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789099, Length=128, Percent_Identity=36.71875, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082174, Length=161, Percent_Identity=32.9192546583851, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 42369; Mature: 42369

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFVSHGSQPLVKGITVQNNT
CCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCEEHHHHHCCCCCCEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEECC
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAPGNVSIQAAAAGKVV
CCCCHHCCCCCCCCCEEEECCCCCCCCCCHHCEEEEHEECEEEECCCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC
>Mature Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFVSHGSQPLVKGITVQNNT
CCHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCEEHHHHHCCCCCCEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEECC
QTQSQTQTAQPTSIPAVFKFPTQGRISSTFDMRWEQMHYGIDIAAPGNVSIQAAAAGKVV
CCCCHHCCCCCCCCCEEEECCCCCCCCCCHHCEEEEHEECEEEECCCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]