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The map label for this gene is secY [H]

Identifier: 218901335

GI number: 218901335

Start: 131261

End: 131458

Strand: Direct

Name: secY [H]

Synonym: BCAH820_0143

Alternate gene names: 218901335

Gene position: 131261-131458 (Clockwise)

Preceding gene: 218901334

Following gene: 218901336

Centisome position: 2.48

GC content: 42.93

Gene sequence:

>198_bases
TTGACCTTTGTAGGATCAATTTTCCTAGCAGCGATTGCAATCTTACCAGTTATCTTTACGAAGCTGGGCAATCTTCCTCC
ATCTGCACAGATCGGTGGAACGAGTATGTTAATCGTTGTCGGCGTTGCTTTAGAAACAATGAAGCAGCTAGAAAGCCAAC
TGGTAAAACGCCATTACAAAGGGTTTATCAAGCAGTGA

Upstream 100 bases:

>100_bases
GAGCAAATGTCAGAGAATCTAAACCAAMCAAGGTGGATATGTTCCAGGTATTCGTCCGGGTAAGAATACGGAACAATATC
TAACAAAAATCTTGTATCGT

Downstream 100 bases:

>100_bases
GTAAGTGGGAAGTATTGTCTTCCCTACATGCTCATGTACTCTGAGGGGGAAACAAGGATGAACTTAATTTTAATGGGGCT
TCCTGGTGCTGGTAAAGGTA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ

Sequences:

>Translated_65_residues
MTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ
>Mature_64_residues
TFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 7017; Mature: 6885

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFIKQ
HHCCC
>Mature Secondary Structure 
TFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLESQLVKRHYK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFIKQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1554691 [H]