Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884701

Identifier: 218884701

GI number: 218884701

Start: 1292396

End: 1292962

Strand: Reverse

Name: 218884701

Synonym: DKAM_1390

Alternate gene names: NA

Gene position: 1292962-1292396 (Counterclockwise)

Preceding gene: 218884703

Following gene: 218884700

Centisome position: 94.71

GC content: 46.56

Gene sequence:

>567_bases
ATGGTGGTAGGCTTGATAACCGAGCAGGAGGCATTAAAGAAAGCCGTTGAAACCACCGCATCACTAATGCTGGCATCAGC
TAAGACAGCGCCTAAGGCACGGGGCATAGACAACATAGTATCAGCCATTATAACCGGGAAACGGGAGTTAGAGACGCTGG
CAGAGTACATGAAGAAGCTCGCAGAAAAGTACGGTGCGTTCTTCGAGAGAGATGCTGAGAACGTGTTGAATAGCGACGCG
GTAGTACTAATAGGCTGTAAAATAGCGAGGCTCAACCTAGCTAAGCCGGAGAAATGGGTGCTCGACGCAGACACCGTTAA
CTCAATAGTAAACCTGGGCATAGCACTAGGTTCAGCAGTCAAGACTGCATCAATGCTAAACATAGACAATAGGATAATGT
ACTCTATAGGCGTGGCGGCTCAGGAACTGGGATTAATAGACGCTGACATCGTATACGGGATACCATTATCAGTTAAAGGC
AAGAACATATACTTCGACAGGAAATTCCCAAGTAACCCAGTGAACCCTGGAGACTTGTTTTCAACATACCTAAACCACAC
AATATGA

Upstream 100 bases:

>100_bases
CCATGTACATGGTTTACAAATATAGCACAGTAATCAAGGAACTAGGGGATCGGCATGGAGACCAGTATATATTCTTGAGG
GTAGATCTATATAGTGTAAC

Downstream 100 bases:

>100_bases
TCTCACTTATACTGGGTGAAATATTACTTAGTTGATTCAAAAACACCCGGGAACCAGTTCCAAAATATATAGATACCAAG
TAACCAATAAATTTCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA
VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG
KNIYFDRKFPSNPVNPGDLFSTYLNHTI

Sequences:

>Translated_188_residues
MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA
VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG
KNIYFDRKFPSNPVNPGDLFSTYLNHTI
>Mature_188_residues
MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKLAEKYGAFFERDAENVLNSDA
VVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAVKTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKG
KNIYFDRKFPSNPVNPGDLFSTYLNHTI

Specific function: Unknown

COG id: COG4739

COG function: function code S; Uncharacterized protein containing a ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019224 [H]

Pfam domain/function: PF09918 DUF2148 [H]

EC number: NA

Molecular weight: Translated: 20346; Mature: 20346

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKL
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AEKYGAFFERDAENVLNSDAVVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAV
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHH
KTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKGKNIYFDRKFPSNPVNPGDLF
HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEEEEECCCCCCCCCHHHHH
STYLNHTI
HHHHHCCC
>Mature Secondary Structure
MVVGLITEQEALKKAVETTASLMLASAKTAPKARGIDNIVSAIITGKRELETLAEYMKKL
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AEKYGAFFERDAENVLNSDAVVLIGCKIARLNLAKPEKWVLDADTVNSIVNLGIALGSAV
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHH
KTASMLNIDNRIMYSIGVAAQELGLIDADIVYGIPLSVKGKNIYFDRKFPSNPVNPGDLF
HHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCEEEEECCCCCCCCCHHHHH
STYLNHTI
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]