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The map label for this gene is 218884641

Identifier: 218884641

GI number: 218884641

Start: 1240995

End: 1241483

Strand: Reverse

Name: 218884641

Synonym: DKAM_1330

Alternate gene names: NA

Gene position: 1241483-1240995 (Counterclockwise)

Preceding gene: 218884642

Following gene: 218884640

Centisome position: 90.94

GC content: 42.33

Gene sequence:

>489_bases
ATGGCAAATAGCAGAGAAACTGAAAGAAGAAAAGTAGTGCTTCAATCCATAGAGATATCTTCTTTTTGCCACGCCACAGA
GGATTGCAACAGAGTCCGTGCATCAATACTTAACTTAATTCCCCCTGAAATACGGGGTAAACTAATACTAATCGAGGAAG
CCGTTGAAGGCTACTATGGTAATAGAATAGTAGTCATAAAGACACAGATACTTGAGGAGTGCGAGGAAGTACTTAAATAC
TTATTATCCACTATGAGCGACACTGAGAAGTCATTAATGAAGATCACCCTACCCCTTAGATTCGATCCTAGAACTGGGCG
CTTGATACTGCGTATCAGCAAGCAGGATGCCTTCCTCGGAAACATGAAACTACTCGACTCCGACGACGTTGTAAAAATAA
CGCTCCACTTCAAAGGAGTTAAAAGCATTGAGAAGATATCGGGATATATCGATGGCTTGACATCGCTGGGACAGTCAAGT
ACCAGCTAG

Upstream 100 bases:

>100_bases
GTCGTGGACTCAGAGGCACAGTGTACTACAAGTGGAAACGTAAACTGAAAGAGAGAGAGTTGAAGAAGCGTCACGAAGCC
AGTAGGGGAGCACGTGATCC

Downstream 100 bases:

>100_bases
GCTTAAAGATCCCGCTCCCTAGCCATCATTAATAATAAGCTTGACTACCTTAATTACATAGGAGGTTCCAAATGTTTATA
GATGTCAATGTTGCTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MANSRETERRKVVLQSIEISSFCHATEDCNRVRASILNLIPPEIRGKLILIEEAVEGYYGNRIVVIKTQILEECEEVLKY
LLSTMSDTEKSLMKITLPLRFDPRTGRLILRISKQDAFLGNMKLLDSDDVVKITLHFKGVKSIEKISGYIDGLTSLGQSS
TS

Sequences:

>Translated_162_residues
MANSRETERRKVVLQSIEISSFCHATEDCNRVRASILNLIPPEIRGKLILIEEAVEGYYGNRIVVIKTQILEECEEVLKY
LLSTMSDTEKSLMKITLPLRFDPRTGRLILRISKQDAFLGNMKLLDSDDVVKITLHFKGVKSIEKISGYIDGLTSLGQSS
TS
>Mature_161_residues
ANSRETERRKVVLQSIEISSFCHATEDCNRVRASILNLIPPEIRGKLILIEEAVEGYYGNRIVVIKTQILEECEEVLKYL
LSTMSDTEKSLMKITLPLRFDPRTGRLILRISKQDAFLGNMKLLDSDDVVKITLHFKGVKSIEKISGYIDGLTSLGQSST
S

Specific function: Unknown

COG id: COG1325

COG function: function code J; Predicted exosome subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022803
- InterPro:   IPR002739 [H]

Pfam domain/function: PF01877 DUF54 [H]

EC number: NA

Molecular weight: Translated: 18276; Mature: 18144

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSRETERRKVVLQSIEISSFCHATEDCNRVRASILNLIPPEIRGKLILIEEAVEGYYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCC
NRIVVIKTQILEECEEVLKYLLSTMSDTEKSLMKITLPLRFDPRTGRLILRISKQDAFLG
CEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEEECCCCCEEEEEECCCCCEEC
NMKLLDSDDVVKITLHFKGVKSIEKISGYIDGLTSLGQSSTS
CEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ANSRETERRKVVLQSIEISSFCHATEDCNRVRASILNLIPPEIRGKLILIEEAVEGYYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCC
NRIVVIKTQILEECEEVLKYLLSTMSDTEKSLMKITLPLRFDPRTGRLILRISKQDAFLG
CEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEEECCCCCEEEEEECCCCCEEC
NMKLLDSDDVVKITLHFKGVKSIEKISGYIDGLTSLGQSSTS
CEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]