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The map label for this gene is 218884603

Identifier: 218884603

GI number: 218884603

Start: 1209926

End: 1211152

Strand: Reverse

Name: 218884603

Synonym: DKAM_1292

Alternate gene names: NA

Gene position: 1211152-1209926 (Counterclockwise)

Preceding gene: 218884604

Following gene: 218884602

Centisome position: 88.71

GC content: 45.4

Gene sequence:

>1227_bases
ATGGCCAAGTATCTTATAAGGGCTAGGATAGAAATCGATGGCGTAGTCGAGAAGCACGATATAATTGGCGCCATCTTTGG
GCAGACTGAAGGATTATTTGGAAACGAGTTCGATCTAAGGGTGTTACAGGATAAGGGGCGTATAGGTAGAATACAGGTTA
ATACTAAGACCCAGGGCAGTAAGACCACCGGCGAGATCCTGATCCCAAGTAACCTCGATCGTGTGGAGACAGCATTACTT
GCCGCATTAATTGAGACCGTTGATAAAGTAGGCCCCTACGACGCATCTATATCAATAGTAGACATAGTAGACTTAAGGAT
GGAGAAGATAAAGAAGATAATGGAGAGGACAGTAGAAATACTTAGAAGATGGGGTAAGGAGAAGACCCCGGATGTAAAAG
AGCTCATTAAGTCGATCCAGGAATACCTGAAGGTCCCCGAGCCCGTCTCATATGGGCCTGAGGAACTTCCGGCAGGACCC
GATGTCGATAAAGCTGAGGAAATAATAATCGTGGAGGGGAGGGCAGACGTTATAAACCTGTTGCGCTATGGGTACACCAA
CATAATAGCTCTAGGAGGCGCTAGGAGAGTACCGGATACTATTAAAAAGCTTGCTGAGCTGAAGAAGACAACGCTATTCG
TGGATGGGGATCATGGCGGAGACTTAATAATGAAGGAAGTACTGAGGAACGCGAAGATAGACTATATAGCGCGTGCGCCA
CCTGGTCGCGAGGTAGAGGAGTTAAGTAGTCGTGAAATAGAGGAGGCACTAAAGAAGAAAATAGAGATCTTCCAGTACCT
AGAAGAGCAGGTTAAACAAGGCAACAAGGAGGCTCAGTTGCTCATACAAATACAGAGGAGGCTTCATAAGCTACCTGAAG
AGGTGGTTAAACCTCCTGAGAAGGTTGCAAAGGAAATCACCGAGACACTATCTCTCCCTGTTAAATTAATTGAGGATATC
AAGAGCCTATATGGAACGCTCGAAGCCATATTTTACTCTAGCCAGTGGGACCAAGTAAAAAGGATACCCGTGAGAGATCT
CGTCTCAGAGATTCAGGCTTCCGAGCCTGAGAAAATACACGCCATTGTATTTGATGGTATTATAACTCAGAGACTGATTG
ATGCCGTAGTGGAGAAACGGGTTAAAATACTGATTGGAGCCAGGCTGGGGAAAATAACGTTTAAAACACCCGAGCTAACT
ATTCTAACTTTTAACGAGCTCGCCTGA

Upstream 100 bases:

>100_bases
GGATAAGAATAGTATAATAGGGTTTCCGATAATTATTTCAAATAAACACCATGTAATATTAGTCCCTTACAACAAAATCT
ATTTTGATGGTGTATAGTAA

Downstream 100 bases:

>100_bases
GACCCGTTATAGTGGCTTGGTTCTGGTTTACACCTACTTTTCAACCAATAAATACAACCTATGGCTAAACTAGGTGTTAA
ACCATGAAACGCTACCCGCT

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAKYLIRARIEIDGVVEKHDIIGAIFGQTEGLFGNEFDLRVLQDKGRIGRIQVNTKTQGSKTTGEILIPSNLDRVETALL
AALIETVDKVGPYDASISIVDIVDLRMEKIKKIMERTVEILRRWGKEKTPDVKELIKSIQEYLKVPEPVSYGPEELPAGP
DVDKAEEIIIVEGRADVINLLRYGYTNIIALGGARRVPDTIKKLAELKKTTLFVDGDHGGDLIMKEVLRNAKIDYIARAP
PGREVEELSSREIEEALKKKIEIFQYLEEQVKQGNKEAQLLIQIQRRLHKLPEEVVKPPEKVAKEITETLSLPVKLIEDI
KSLYGTLEAIFYSSQWDQVKRIPVRDLVSEIQASEPEKIHAIVFDGIITQRLIDAVVEKRVKILIGARLGKITFKTPELT
ILTFNELA

Sequences:

>Translated_408_residues
MAKYLIRARIEIDGVVEKHDIIGAIFGQTEGLFGNEFDLRVLQDKGRIGRIQVNTKTQGSKTTGEILIPSNLDRVETALL
AALIETVDKVGPYDASISIVDIVDLRMEKIKKIMERTVEILRRWGKEKTPDVKELIKSIQEYLKVPEPVSYGPEELPAGP
DVDKAEEIIIVEGRADVINLLRYGYTNIIALGGARRVPDTIKKLAELKKTTLFVDGDHGGDLIMKEVLRNAKIDYIARAP
PGREVEELSSREIEEALKKKIEIFQYLEEQVKQGNKEAQLLIQIQRRLHKLPEEVVKPPEKVAKEITETLSLPVKLIEDI
KSLYGTLEAIFYSSQWDQVKRIPVRDLVSEIQASEPEKIHAIVFDGIITQRLIDAVVEKRVKILIGARLGKITFKTPELT
ILTFNELA
>Mature_407_residues
AKYLIRARIEIDGVVEKHDIIGAIFGQTEGLFGNEFDLRVLQDKGRIGRIQVNTKTQGSKTTGEILIPSNLDRVETALLA
ALIETVDKVGPYDASISIVDIVDLRMEKIKKIMERTVEILRRWGKEKTPDVKELIKSIQEYLKVPEPVSYGPEELPAGPD
VDKAEEIIIVEGRADVINLLRYGYTNIIALGGARRVPDTIKKLAELKKTTLFVDGDHGGDLIMKEVLRNAKIDYIARAPP
GREVEELSSREIEEALKKKIEIFQYLEEQVKQGNKEAQLLIQIQRRLHKLPEEVVKPPEKVAKEITETLSLPVKLIEDIK
SLYGTLEAIFYSSQWDQVKRIPVRDLVSEIQASEPEKIHAIVFDGIITQRLIDAVVEKRVKILIGARLGKITFKTPELTI
LTFNELA

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1292_DESK1 (B8D687)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002428985.1
- ProteinModelPortal:   B8D687
- GeneID:   7171350
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1292
- HOGENOM:   HBG541216
- OMA:   GYRNVIA
- ProtClustDB:   PRK04031
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 46066; Mature: 45935

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYLIRARIEIDGVVEKHDIIGAIFGQTEGLFGNEFDLRVLQDKGRIGRIQVNTKTQGS
CCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
KTTGEILIPSNLDRVETALLAALIETVDKVGPYDASISIVDIVDLRMEKIKKIMERTVEI
CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LRRWGKEKTPDVKELIKSIQEYLKVPEPVSYGPEELPAGPDVDKAEEIIIVEGRADVINL
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCHHHHHH
LRYGYTNIIALGGARRVPDTIKKLAELKKTTLFVDGDHGGDLIMKEVLRNAKIDYIARAP
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCEEECCC
PGREVEELSSREIEEALKKKIEIFQYLEEQVKQGNKEAQLLIQIQRRLHKLPEEVVKPPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCHH
KVAKEITETLSLPVKLIEDIKSLYGTLEAIFYSSQWDQVKRIPVRDLVSEIQASEPEKIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCEE
AIVFDGIITQRLIDAVVEKRVKILIGARLGKITFKTPELTILTFNELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCC
>Mature Secondary Structure 
AKYLIRARIEIDGVVEKHDIIGAIFGQTEGLFGNEFDLRVLQDKGRIGRIQVNTKTQGS
CCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
KTTGEILIPSNLDRVETALLAALIETVDKVGPYDASISIVDIVDLRMEKIKKIMERTVEI
CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LRRWGKEKTPDVKELIKSIQEYLKVPEPVSYGPEELPAGPDVDKAEEIIIVEGRADVINL
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCHHHHHH
LRYGYTNIIALGGARRVPDTIKKLAELKKTTLFVDGDHGGDLIMKEVLRNAKIDYIARAP
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCEEECCC
PGREVEELSSREIEEALKKKIEIFQYLEEQVKQGNKEAQLLIQIQRRLHKLPEEVVKPPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCHH
KVAKEITETLSLPVKLIEDIKSLYGTLEAIFYSSQWDQVKRIPVRDLVSEIQASEPEKIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCEE
AIVFDGIITQRLIDAVVEKRVKILIGARLGKITFKTPELTILTFNELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA