| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884533
Identifier: 218884533
GI number: 218884533
Start: 1144366
End: 1144611
Strand: Reverse
Name: 218884533
Synonym: DKAM_1222
Alternate gene names: NA
Gene position: 1144611-1144366 (Counterclockwise)
Preceding gene: 218884534
Following gene: 218884530
Centisome position: 83.84
GC content: 41.87
Gene sequence:
>246_bases ATGAGTGTAAACAATAGGCATAGATGCGTGGTCTGTGGAAGAATATTCCCGAGGGGACAGGGCATAGTAATCAATAAGGA GGGTGTTGTCCTGGAATTCCATAGTTCCAAGTGCGCATCCAAGTTCTTCAGTATGCTACTGGAGAGAATACCGTTCGAAG AAGTATCACCATATATTAGGAAACTCATTAATGAATTCAATGAGTTAAACGAACAGAAGGCAAAGGCCAGGGCTAAGAAG ATATAG
Upstream 100 bases:
>100_bases TTCGTAGAACTCGTGAACACTAGGGGTAACACTGTTTTAACCAGGCTATACACTCTTGAGGTTGGAAAGCTCACCGAGAA ACTAAGGGAGGCAGGTGTAA
Downstream 100 bases:
>100_bases TTTTGAAAACTATATATTCTCCATGTATATAGTGAAGATGATTGGATGAGGATCACTTGCCCCCAAGCGACCTTGGATAG GGATGAAGAAATTACCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSVNNRHRCVVCGRIFPRGQGIVINKEGVVLEFHSSKCASKFFSMLLERIPFEEVSPYIRKLINEFNELNEQKAKARAKK I
Sequences:
>Translated_81_residues MSVNNRHRCVVCGRIFPRGQGIVINKEGVVLEFHSSKCASKFFSMLLERIPFEEVSPYIRKLINEFNELNEQKAKARAKK I >Mature_80_residues SVNNRHRCVVCGRIFPRGQGIVINKEGVVLEFHSSKCASKFFSMLLERIPFEEVSPYIRKLINEFNELNEQKAKARAKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9381; Mature: 9250
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNNRHRCVVCGRIFPRGQGIVINKEGVVLEFHSSKCASKFFSMLLERIPFEEVSPYIR CCCCCCCEEEEECCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCHHHCCHHHH KLINEFNELNEQKAKARAKKI HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVNNRHRCVVCGRIFPRGQGIVINKEGVVLEFHSSKCASKFFSMLLERIPFEEVSPYIR CCCCCCEEEEECCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCHHHCCHHHH KLINEFNELNEQKAKARAKKI HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA