| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yehL [H]
Identifier: 218884484
GI number: 218884484
Start: 1093490
End: 1094407
Strand: Reverse
Name: yehL [H]
Synonym: DKAM_1173
Alternate gene names: 218884484
Gene position: 1094407-1093490 (Counterclockwise)
Preceding gene: 218884485
Following gene: 218884483
Centisome position: 80.16
GC content: 46.3
Gene sequence:
>918_bases ATGGTAGCCGATTCCATGGATCCCATTGTTAGAAAGGTTTATGATATATATGGCCAGGTGATTGAGGCTAGGCAACCCGT CAGGGATCCCGAGGGGATGATAAGAGCTTTAAGGGAAGAGTTTAAGCTCGTGGTTAAACCCTATGTTGTTTACCTAACTA TCTCAGCCTTCATCAATAACAGGCCTGTCCTCTACGAGGGTCCTCCGGGTACCGGTAAGACCGAGATAGGTGAGGCCATA TTATATTTATGGAGCGGTAGGAAACCCTTTATACTCCCATGTAGCGAAAACTATGATGAGTACAGGGTCATAGGGGACTT CCACCCGGCAATAGCCATGTCAAAGGGTTTTAATGAGGAGAGCTTCATACCTAGGCCGTTGCTAGCCGGCTTAATAATGG AGACCGGTGTCCTAATAGATGAGATAAGGAGAAGTAGTGAGGAGTTCCAGAATCTCTTGTTAGATATCATTGATAAAAGG AGGATAATAATACCGGAGTTGAAGAGGGTTTACAGGCAGAATGGATCAGGGTTCCAAGTAGTATTCACAAGCAACCCCTA CGATATCGCCCAGGGAGAGCTCAGTGATGCCTTCCTAAGGAGGGTTGTTAGGATAGAGTTCCAGTATCCATCCATGGAAG AGGAGTATGAAATAGTGGAGTTGAAACTAGGTGGCTTAAGCAGTAGGCTCAGTGATGCGGTGATATTTAAGGCTCTTGAA GCTGTTAGGAAGCTGAGGAGTAAAGCAGTATACAAGCCCGGGATCTCCGACACGGTTGCATGGCTCACTCTAACCGCGTT GTTATCCAATATCAAGGGTAAGAGCAAGGCTAGTGAGGAAGAACTACGTGAAGCCGGACGGGCTGTGCTCTATAAGAATC CAGAGGATGAGGAATTAGTCAATGAGATACTCGGATAA
Upstream 100 bases:
>100_bases GGCTAGTCTTTTCGTAGACATTATTTAATAAATCCCTTTAACTACTTCCTTGTAATTGGATAATGTTTAACGCTTCCATA TTATTGAATGGGTTGTAATC
Downstream 100 bases:
>100_bases CGTTGAAGAGTTGAGAAGGCTCATCGATGAGAGGATCCGGGTTGAACTAGATGAGCTTAAGGAGACCCTAGGGGAGTTTA AGAAGGCCTCCATCGACAAA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MVADSMDPIVRKVYDIYGQVIEARQPVRDPEGMIRALREEFKLVVKPYVVYLTISAFINNRPVLYEGPPGTGKTEIGEAI LYLWSGRKPFILPCSENYDEYRVIGDFHPAIAMSKGFNEESFIPRPLLAGLIMETGVLIDEIRRSSEEFQNLLLDIIDKR RIIIPELKRVYRQNGSGFQVVFTSNPYDIAQGELSDAFLRRVVRIEFQYPSMEEEYEIVELKLGGLSSRLSDAVIFKALE AVRKLRSKAVYKPGISDTVAWLTLTALLSNIKGKSKASEEELREAGRAVLYKNPEDEELVNEILG
Sequences:
>Translated_305_residues MVADSMDPIVRKVYDIYGQVIEARQPVRDPEGMIRALREEFKLVVKPYVVYLTISAFINNRPVLYEGPPGTGKTEIGEAI LYLWSGRKPFILPCSENYDEYRVIGDFHPAIAMSKGFNEESFIPRPLLAGLIMETGVLIDEIRRSSEEFQNLLLDIIDKR RIIIPELKRVYRQNGSGFQVVFTSNPYDIAQGELSDAFLRRVVRIEFQYPSMEEEYEIVELKLGGLSSRLSDAVIFKALE AVRKLRSKAVYKPGISDTVAWLTLTALLSNIKGKSKASEEELREAGRAVLYKNPEDEELVNEILG >Mature_305_residues MVADSMDPIVRKVYDIYGQVIEARQPVRDPEGMIRALREEFKLVVKPYVVYLTISAFINNRPVLYEGPPGTGKTEIGEAI LYLWSGRKPFILPCSENYDEYRVIGDFHPAIAMSKGFNEESFIPRPLLAGLIMETGVLIDEIRRSSEEFQNLLLDIIDKR RIIIPELKRVYRQNGSGFQVVFTSNPYDIAQGELSDAFLRRVVRIEFQYPSMEEEYEIVELKLGGLSSRLSDAVIFKALE AVRKLRSKAVYKPGISDTVAWLTLTALLSNIKGKSKASEEELREAGRAVLYKNPEDEELVNEILG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082049, Length=239, Percent_Identity=26.7782426778243, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 34656; Mature: 34656
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADSMDPIVRKVYDIYGQVIEARQPVRDPEGMIRALREEFKLVVKPYVVYLTISAFINN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPVLYEGPPGTGKTEIGEAILYLWSGRKPFILPCSENYDEYRVIGDFHPAIAMSKGFNEE CCEEEECCCCCCCHHHHHHHHHEECCCCCEEEECCCCCCCEEEECCCCHHHHHHCCCCCC SFIPRPLLAGLIMETGVLIDEIRRSSEEFQNLLLDIIDKRRIIIPELKRVYRQNGSGFQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCEEE VFTSNPYDIAQGELSDAFLRRVVRIEFQYPSMEEEYEIVELKLGGLSSRLSDAVIFKALE EEECCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH AVRKLRSKAVYKPGISDTVAWLTLTALLSNIKGKSKASEEELREAGRAVLYKNPEDEELV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHH NEILG HHHCC >Mature Secondary Structure MVADSMDPIVRKVYDIYGQVIEARQPVRDPEGMIRALREEFKLVVKPYVVYLTISAFINN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPVLYEGPPGTGKTEIGEAILYLWSGRKPFILPCSENYDEYRVIGDFHPAIAMSKGFNEE CCEEEECCCCCCCHHHHHHHHHEECCCCCEEEECCCCCCCEEEECCCCHHHHHHCCCCCC SFIPRPLLAGLIMETGVLIDEIRRSSEEFQNLLLDIIDKRRIIIPELKRVYRQNGSGFQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCEEE VFTSNPYDIAQGELSDAFLRRVVRIEFQYPSMEEEYEIVELKLGGLSSRLSDAVIFKALE EEECCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH AVRKLRSKAVYKPGISDTVAWLTLTALLSNIKGKSKASEEELREAGRAVLYKNPEDEELV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHH NEILG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]