Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884483

Identifier: 218884483

GI number: 218884483

Start: 1091596

End: 1093506

Strand: Reverse

Name: 218884483

Synonym: DKAM_1172

Alternate gene names: NA

Gene position: 1093506-1091596 (Counterclockwise)

Preceding gene: 218884484

Following gene: 218884482

Centisome position: 80.1

GC content: 46.57

Gene sequence:

>1911_bases
ATGAGATACTCGGATAACGTTGAAGAGTTGAGAAGGCTCATCGATGAGAGGATCCGGGTTGAACTAGATGAGCTTAAGGA
GACCCTAGGGGAGTTTAAGAAGGCCTCCATCGACAAAGTGGTATTATATATTGGAATGAAGCTTGCCCTCTCAATGATCA
CCAGTAATCCCATCCTCCTCGCTGAGTTAAGGGGTAAACTGATTGAATCCCTAGGACTCACAGATAGAACGCAGGGTGAG
CCAAGCGGTACAGTGGAGTTATTTACACTGGATGAGAAACTATACAGGAGGCTAGGTAGGACACGGTTTTTAACCATTAG
CAGTATGCTCAGCGAGGAGTCTTCGAGGAGAGAGATACTCACATACATATGGATGAGGAAGGCAGGGATTCTGAAGAAGC
GATCCAATGGCTCCCTAGTAGTCGATAGAGACGAGTTGTCGAGGTATCGGGCTGGCTCCACATATAGGTTAGAGTTAAAT
GATATAAAGCGGTTCCTCGGTGAGATACCTAGTAGGCTCTGGAGTAAAGTACTCACCGAGGACTTATTGAATAGTGTTAA
GACAGAGGACCTAGTGTCTCTAGCCGAGAAGTTCTACGGGTTCAACCATAGCGTGGATAATAGGATAATCGGTGAGTTGA
GGAGGCGTATAGTAGAGGGATGGATGCCTTCGTTCAACGATGCACGTAGACTCGAGAAAGTATTAGGGAGGGTTCTTAAA
GGGGTTAAAGCGGATATACCCCCGCATCTACTTCAATATATGGATAACGCTGCCGAGTATGTGAAAGGAAAGGAAAGGGT
GCTTGTTGAAAGAATAGAGGAGCTCCCATTGAAGGAAAGATGGGGGGTTTTAAGAGGGCTTAGACAAAGGGTGAGGGATG
CTGATTTCTATAGGCGCCTTAACCCCTTATCATTAATGGAGTTAAAGAGCCTTGGTAGCCTGGATAAAGCTCTCGCCAGC
AAGATAATGCTGGGGGAGGTTATAGGGAGTTATGTGGAGTACATGTTGACCCGTGATACCTCCTTCAAGGTGTACGCCTT
ATACATCGCTGAGAGGATTGATCCATCTATGCTGGAGCCTATGTACAGGCCAGTGCTCGAGAGTATTATTGTAGGCGATG
AGAAGAAGCTATTGTTCCATCTTGGTAGGGGGATGGGCTTCGACCTAATAGAGCTTATCTCGATAAAGCTCACCGAGGAG
TATTCTAGGAGTGGAGTCATTGATCAAGCCCTCGTGAAGCGGGCAATAGCCATTGGCATGAGGCTGTTGAACTACATGAA
GGGCGGGGAGGGTCATGCGCGGAGGATCGAGAAGACAGGTTTAAGGGGTAGGCTTGACACCAGGGGCACGGTGTATAAGA
GGATTCGTTTAAGTAATGAAATAGTCTACAGGAGACATAGGAGAAGGCAACGCATGATAGGCATTGTAGATGTAAGTGGT
AGCATGGCTAGGTTCGCTCTATGGTCGATCCTCTCTCTGGCAGTGTTATTCCCAAGCGTCTCATACATAGTGTTGTTTAG
TGAGAGAAGCAATGTATATAGATCCCCAGTTAAGAAGACTGCCCGGATGCTCGCAGGCTTCCTAGAGAAACTATATACGG
AGGGATTCAAGGGGTATACTAATATATCTGATGCATTAAGGAGAGCCGGCGAGTTAGCTCTGAGAAGCAACTCTAGGACC
ATGGTGTTATTCAGCGACTTAAAGCAGACGATCCCCGATGTAGACCCATGGATCGTGGCGGGCGAGCTTGTTAAGAAGGG
ATTGAAGGTGATCATCGTAGTACCACGTAGCATCGAGGAGGAAACTATAGAGAAGTACAGGAAAGAGGGATGTGATGTAG
TGGTTGTCGAGAACCCTGAGAACATAGCAAACATTTTAAAAAGGAGGATAAATCTTAAAAATAGAGTCTAG

Upstream 100 bases:

>100_bases
TTATCCAATATCAAGGGTAAGAGCAAGGCTAGTGAGGAAGAACTACGTGAAGCCGGACGGGCTGTGCTCTATAAGAATCC
AGAGGATGAGGAATTAGTCA

Downstream 100 bases:

>100_bases
TAGTGTCTATTACGTTAGTGCTTAACGTGTGAGGGGATGATGGATTTGGCGGTGAATTTACAGGATCTCCCGGTGGAATG
GAGGAAGTTCAAGTATAGAG

Product: VWA_CoxE domain containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MRYSDNVEELRRLIDERIRVELDELKETLGEFKKASIDKVVLYIGMKLALSMITSNPILLAELRGKLIESLGLTDRTQGE
PSGTVELFTLDEKLYRRLGRTRFLTISSMLSEESSRREILTYIWMRKAGILKKRSNGSLVVDRDELSRYRAGSTYRLELN
DIKRFLGEIPSRLWSKVLTEDLLNSVKTEDLVSLAEKFYGFNHSVDNRIIGELRRRIVEGWMPSFNDARRLEKVLGRVLK
GVKADIPPHLLQYMDNAAEYVKGKERVLVERIEELPLKERWGVLRGLRQRVRDADFYRRLNPLSLMELKSLGSLDKALAS
KIMLGEVIGSYVEYMLTRDTSFKVYALYIAERIDPSMLEPMYRPVLESIIVGDEKKLLFHLGRGMGFDLIELISIKLTEE
YSRSGVIDQALVKRAIAIGMRLLNYMKGGEGHARRIEKTGLRGRLDTRGTVYKRIRLSNEIVYRRHRRRQRMIGIVDVSG
SMARFALWSILSLAVLFPSVSYIVLFSERSNVYRSPVKKTARMLAGFLEKLYTEGFKGYTNISDALRRAGELALRSNSRT
MVLFSDLKQTIPDVDPWIVAGELVKKGLKVIIVVPRSIEEETIEKYRKEGCDVVVVENPENIANILKRRINLKNRV

Sequences:

>Translated_636_residues
MRYSDNVEELRRLIDERIRVELDELKETLGEFKKASIDKVVLYIGMKLALSMITSNPILLAELRGKLIESLGLTDRTQGE
PSGTVELFTLDEKLYRRLGRTRFLTISSMLSEESSRREILTYIWMRKAGILKKRSNGSLVVDRDELSRYRAGSTYRLELN
DIKRFLGEIPSRLWSKVLTEDLLNSVKTEDLVSLAEKFYGFNHSVDNRIIGELRRRIVEGWMPSFNDARRLEKVLGRVLK
GVKADIPPHLLQYMDNAAEYVKGKERVLVERIEELPLKERWGVLRGLRQRVRDADFYRRLNPLSLMELKSLGSLDKALAS
KIMLGEVIGSYVEYMLTRDTSFKVYALYIAERIDPSMLEPMYRPVLESIIVGDEKKLLFHLGRGMGFDLIELISIKLTEE
YSRSGVIDQALVKRAIAIGMRLLNYMKGGEGHARRIEKTGLRGRLDTRGTVYKRIRLSNEIVYRRHRRRQRMIGIVDVSG
SMARFALWSILSLAVLFPSVSYIVLFSERSNVYRSPVKKTARMLAGFLEKLYTEGFKGYTNISDALRRAGELALRSNSRT
MVLFSDLKQTIPDVDPWIVAGELVKKGLKVIIVVPRSIEEETIEKYRKEGCDVVVVENPENIANILKRRINLKNRV
>Mature_636_residues
MRYSDNVEELRRLIDERIRVELDELKETLGEFKKASIDKVVLYIGMKLALSMITSNPILLAELRGKLIESLGLTDRTQGE
PSGTVELFTLDEKLYRRLGRTRFLTISSMLSEESSRREILTYIWMRKAGILKKRSNGSLVVDRDELSRYRAGSTYRLELN
DIKRFLGEIPSRLWSKVLTEDLLNSVKTEDLVSLAEKFYGFNHSVDNRIIGELRRRIVEGWMPSFNDARRLEKVLGRVLK
GVKADIPPHLLQYMDNAAEYVKGKERVLVERIEELPLKERWGVLRGLRQRVRDADFYRRLNPLSLMELKSLGSLDKALAS
KIMLGEVIGSYVEYMLTRDTSFKVYALYIAERIDPSMLEPMYRPVLESIIVGDEKKLLFHLGRGMGFDLIELISIKLTEE
YSRSGVIDQALVKRAIAIGMRLLNYMKGGEGHARRIEKTGLRGRLDTRGTVYKRIRLSNEIVYRRHRRRQRMIGIVDVSG
SMARFALWSILSLAVLFPSVSYIVLFSERSNVYRSPVKKTARMLAGFLEKLYTEGFKGYTNISDALRRAGELALRSNSRT
MVLFSDLKQTIPDVDPWIVAGELVKKGLKVIIVVPRSIEEETIEKYRKEGCDVVVVENPENIANILKRRINLKNRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73266; Mature: 73266

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSDNVEELRRLIDERIRVELDELKETLGEFKKASIDKVVLYIGMKLALSMITSNPILL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AELRGKLIESLGLTDRTQGEPSGTVELFTLDEKLYRRLGRTRFLTISSMLSEESSRREIL
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
TYIWMRKAGILKKRSNGSLVVDRDELSRYRAGSTYRLELNDIKRFLGEIPSRLWSKVLTE
HHHHHHHHHHHEECCCCCEEEEHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
DLLNSVKTEDLVSLAEKFYGFNHSVDNRIIGELRRRIVEGWMPSFNDARRLEKVLGRVLK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GVKADIPPHLLQYMDNAAEYVKGKERVLVERIEELPLKERWGVLRGLRQRVRDADFYRRL
HHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NPLSLMELKSLGSLDKALASKIMLGEVIGSYVEYMLTRDTSFKVYALYIAERIDPSMLEP
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHH
MYRPVLESIIVGDEKKLLFHLGRGMGFDLIELISIKLTEEYSRSGVIDQALVKRAIAIGM
HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RLLNYMKGGEGHARRIEKTGLRGRLDTRGTVYKRIRLSNEIVYRRHRRRQRMIGIVDVSG
HHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
SMARFALWSILSLAVLFPSVSYIVLFSERSNVYRSPVKKTARMLAGFLEKLYTEGFKGYT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NISDALRRAGELALRSNSRTMVLFSDLKQTIPDVDPWIVAGELVKKGLKVIIVVPRSIEE
CHHHHHHHHHHHHEECCCCEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCH
ETIEKYRKEGCDVVVVENPENIANILKRRINLKNRV
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRYSDNVEELRRLIDERIRVELDELKETLGEFKKASIDKVVLYIGMKLALSMITSNPILL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AELRGKLIESLGLTDRTQGEPSGTVELFTLDEKLYRRLGRTRFLTISSMLSEESSRREIL
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
TYIWMRKAGILKKRSNGSLVVDRDELSRYRAGSTYRLELNDIKRFLGEIPSRLWSKVLTE
HHHHHHHHHHHEECCCCCEEEEHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
DLLNSVKTEDLVSLAEKFYGFNHSVDNRIIGELRRRIVEGWMPSFNDARRLEKVLGRVLK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GVKADIPPHLLQYMDNAAEYVKGKERVLVERIEELPLKERWGVLRGLRQRVRDADFYRRL
HHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NPLSLMELKSLGSLDKALASKIMLGEVIGSYVEYMLTRDTSFKVYALYIAERIDPSMLEP
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHH
MYRPVLESIIVGDEKKLLFHLGRGMGFDLIELISIKLTEEYSRSGVIDQALVKRAIAIGM
HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RLLNYMKGGEGHARRIEKTGLRGRLDTRGTVYKRIRLSNEIVYRRHRRRQRMIGIVDVSG
HHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
SMARFALWSILSLAVLFPSVSYIVLFSERSNVYRSPVKKTARMLAGFLEKLYTEGFKGYT
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NISDALRRAGELALRSNSRTMVLFSDLKQTIPDVDPWIVAGELVKKGLKVIIVVPRSIEE
CHHHHHHHHHHHHEECCCCEEEEHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCH
ETIEKYRKEGCDVVVVENPENIANILKRRINLKNRV
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA