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The map label for this gene is rpl19e [H]

Identifier: 218884468

GI number: 218884468

Start: 1084897

End: 1085355

Strand: Reverse

Name: rpl19e [H]

Synonym: DKAM_1157

Alternate gene names: 218884468

Gene position: 1085355-1084897 (Counterclockwise)

Preceding gene: 218884469

Following gene: 218884467

Centisome position: 79.5

GC content: 45.75

Gene sequence:

>459_bases
ATGAGTGACCTAACACTCCAGAAAAGATTGGCAGCTGATCTACTTGGCGTGGGTGTGTCGAGGATTAGAGTGGATCCTGG
TAGAATAGAGGATATCGAGGCAGCCATAACAAGGGAGGATGTGAGGAGGCTGATCAAGGAGGGGGCTATATGGGTTGCCC
CCAAACACGGTATAGCAGGCTATAGCTCCAAGGTTAGGCATAAGCAGAGGGTTAAGGGAAGGAGAAGGGGACATGGTAAG
AGGAAGGGGAGTAAGACCGCTAGGCTGGATGAGAAGGAGGTATGGATGAATAAGATAAGGAAGATAAGGAGGTATCTTAG
ATACCTGAGGGATAGGAAGCTTATCGATGCAAGAACATATAGGAGGCTATATATGCTTGCTAAGGGAGGATACTTTAACT
CTCTTTCATCTCTGAAGCTACACCTTAAGGAAAACAATATCTTAAAGGAGGTTAAATAG

Upstream 100 bases:

>100_bases
GGATTAAGGAAGGCTATTGAACTATACAGGATAGCTGCCTCAAAAGGCTTTAAAGTAGCTAATCCACCTAAAACAACACA
GTTAACACAGGGTGCTTAAC

Downstream 100 bases:

>100_bases
AGGGGTTGGTGAGGCATGGCTAAGGGTCCCCGGTATAAGGTTCCAAGGAGAAGGAGAAGGGAGGGTAAGACTAATTACTA
CAAGAGATATAGAATGATTG

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSDLTLQKRLAADLLGVGVSRIRVDPGRIEDIEAAITREDVRRLIKEGAIWVAPKHGIAGYSSKVRHKQRVKGRRRGHGK
RKGSKTARLDEKEVWMNKIRKIRRYLRYLRDRKLIDARTYRRLYMLAKGGYFNSLSSLKLHLKENNILKEVK

Sequences:

>Translated_152_residues
MSDLTLQKRLAADLLGVGVSRIRVDPGRIEDIEAAITREDVRRLIKEGAIWVAPKHGIAGYSSKVRHKQRVKGRRRGHGK
RKGSKTARLDEKEVWMNKIRKIRRYLRYLRDRKLIDARTYRRLYMLAKGGYFNSLSSLKLHLKENNILKEVK
>Mature_151_residues
SDLTLQKRLAADLLGVGVSRIRVDPGRIEDIEAAITREDVRRLIKEGAIWVAPKHGIAGYSSKVRHKQRVKGRRRGHGKR
KGSKTARLDEKEVWMNKIRKIRRYLRYLRDRKLIDARTYRRLYMLAKGGYFNSLSSLKLHLKENNILKEVK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=146, Percent_Identity=39.7260273972603, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17508673, Length=127, Percent_Identity=38.5826771653543, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6319559, Length=145, Percent_Identity=35.8620689655172, Blast_Score=75, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6319444, Length=145, Percent_Identity=35.8620689655172, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45552831, Length=134, Percent_Identity=41.7910447761194, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI17136322, Length=134, Percent_Identity=41.7910447761194, Blast_Score=97, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17776; Mature: 17645

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTLQKRLAADLLGVGVSRIRVDPGRIEDIEAAITREDVRRLIKEGAIWVAPKHGIAG
CCCCHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
YSSKVRHKQRVKGRRRGHGKRKGSKTARLDEKEVWMNKIRKIRRYLRYLRDRKLIDARTY
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RRLYMLAKGGYFNSLSSLKLHLKENNILKEVK
HHHHHHHCCCCCCCHHHHEEHHCCCCHHHCCC
>Mature Secondary Structure 
SDLTLQKRLAADLLGVGVSRIRVDPGRIEDIEAAITREDVRRLIKEGAIWVAPKHGIAG
CCCHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
YSSKVRHKQRVKGRRRGHGKRKGSKTARLDEKEVWMNKIRKIRRYLRYLRDRKLIDARTY
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RRLYMLAKGGYFNSLSSLKLHLKENNILKEVK
HHHHHHHCCCCCCCHHHHEEHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]