| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884455
Identifier: 218884455
GI number: 218884455
Start: 1075569
End: 1076804
Strand: Reverse
Name: 218884455
Synonym: DKAM_1144
Alternate gene names: NA
Gene position: 1076804-1075569 (Counterclockwise)
Preceding gene: 218884456
Following gene: 218884452
Centisome position: 78.87
GC content: 46.36
Gene sequence:
>1236_bases ATGGTGTTCAATAAATATGTCTTATTAATAGTACTACTGGCTCTACTATTAATCCCACTAGTATTCTCTAACGAATCAGA GGCGTTAATAGTCAATGGGGGCTCAAACAAGGTAAGAGTAGTGATAGGATATAGGGATGAATCCTCTAGGCAGAACCTGT TGAGGAACCTCGGGGTATCACCAGTGAAAGAGATCAGGGATCTAAAGGTACTGGTTGTCGAGATACCTGAGTCATTGATA ACCCGTGTTAAAAGCCTGCCGGGTATTAGATACATTGAGAAAGATATAGAGGCCAGGGCTTTCGGCATAAGCGACTATTA TGGTGACATCAAGTGGAATATGTACATGATCGGCATAACGGATGTCTGGGACTACTATTATCAATACTATGGCAGGTATA CATTCGGTAGGGGGGTAGTCGTAGCTGTCCTTGACACAGGTATTGATTACACCCATCCGGACCTCTATGGCAGGGTTGCA TACTGTATAAGGACAACTGGCTCAACCACTTATAGGGGTACTTCACTAAGTAACTGCATGGATCGAAACGGGCATGGAAC ACATGTAGCCGGGATAATTGCGGCGACTATAAATGGTGCGGGCGTAGCAGGTGTAGCACCAAACGTGACCCTGATAGCGG TTAAAGTACTCTATGACTCAGGAAGCGGGAGCGTTACAGATATAGCTGAGGGAATAGTGGAAGCTGTGAAGGCTGGAGCA TACATACTCAGCATGTCGCTTGGTTCCTCAAGCGATAATAGCGTGTTAAGGGATGCATCAAACTGGGCTTACCAGCAAGG CGCTATACAGATTGTTGCAGCAGGTAACTCTGGCGATGGAAACCCAAGTACAGATAACGTTAACTACCCAGCTAGATACC CATGGGTGATAGCTGTTGCAGCAGTGGATTCAAACGGTAATACACCATCATGGAGTAGTGATGGACCGGAGGTTGATGTG GCGGCGCCCGGAGTCGACATATTATCTACGTACCTGAATAAAAAATACGCTTATCTAAGCGGTACATCAATGGCTACCCC GCATGTAACAGGTGTTGTGGCAGTTATAGAAGCCATGAGGTATGCTGCTGGTAAAAGCTGGCTGGGCTTCGACGCTATTT ATAAAGTCCTGACATCTACAGCATATGATCTAGGTTCTTCAGGCTTCGACGTTTACACCGGGTATGGACTAGTGGATGCG TACAGCGCAGTCCAATACGCGTTAAGTCTACCCTAG
Upstream 100 bases:
>100_bases TGCTTCTCGGTCAGTGTTATGGATCCGGCTTGTTCTCTAGATAAAAAATTTATAAAGTATCCCACTGATTACTGTATGTG ATTTAAATCTGGGTGGGGCT
Downstream 100 bases:
>100_bases TTTCTCCTCCAATATTTTTTCATGGGGTCTCAGACCCCCAATTCTTTTCACACTCCATGTCTCAACATGGATGTTTGATC TCCCTGGTTCTACTCTCCTT
Product: Subtilisin-like serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MVFNKYVLLIVLLALLLIPLVFSNESEALIVNGGSNKVRVVIGYRDESSRQNLLRNLGVSPVKEIRDLKVLVVEIPESLI TRVKSLPGIRYIEKDIEARAFGISDYYGDIKWNMYMIGITDVWDYYYQYYGRYTFGRGVVVAVLDTGIDYTHPDLYGRVA YCIRTTGSTTYRGTSLSNCMDRNGHGTHVAGIIAATINGAGVAGVAPNVTLIAVKVLYDSGSGSVTDIAEGIVEAVKAGA YILSMSLGSSSDNSVLRDASNWAYQQGAIQIVAAGNSGDGNPSTDNVNYPARYPWVIAVAAVDSNGNTPSWSSDGPEVDV AAPGVDILSTYLNKKYAYLSGTSMATPHVTGVVAVIEAMRYAAGKSWLGFDAIYKVLTSTAYDLGSSGFDVYTGYGLVDA YSAVQYALSLP
Sequences:
>Translated_411_residues MVFNKYVLLIVLLALLLIPLVFSNESEALIVNGGSNKVRVVIGYRDESSRQNLLRNLGVSPVKEIRDLKVLVVEIPESLI TRVKSLPGIRYIEKDIEARAFGISDYYGDIKWNMYMIGITDVWDYYYQYYGRYTFGRGVVVAVLDTGIDYTHPDLYGRVA YCIRTTGSTTYRGTSLSNCMDRNGHGTHVAGIIAATINGAGVAGVAPNVTLIAVKVLYDSGSGSVTDIAEGIVEAVKAGA YILSMSLGSSSDNSVLRDASNWAYQQGAIQIVAAGNSGDGNPSTDNVNYPARYPWVIAVAAVDSNGNTPSWSSDGPEVDV AAPGVDILSTYLNKKYAYLSGTSMATPHVTGVVAVIEAMRYAAGKSWLGFDAIYKVLTSTAYDLGSSGFDVYTGYGLVDA YSAVQYALSLP >Mature_411_residues MVFNKYVLLIVLLALLLIPLVFSNESEALIVNGGSNKVRVVIGYRDESSRQNLLRNLGVSPVKEIRDLKVLVVEIPESLI TRVKSLPGIRYIEKDIEARAFGISDYYGDIKWNMYMIGITDVWDYYYQYYGRYTFGRGVVVAVLDTGIDYTHPDLYGRVA YCIRTTGSTTYRGTSLSNCMDRNGHGTHVAGIIAATINGAGVAGVAPNVTLIAVKVLYDSGSGSVTDIAEGIVEAVKAGA YILSMSLGSSSDNSVLRDASNWAYQQGAIQIVAAGNSGDGNPSTDNVNYPARYPWVIAVAAVDSNGNTPSWSSDGPEVDV AAPGVDILSTYLNKKYAYLSGTSMATPHVTGVVAVIEAMRYAAGKSWLGFDAIYKVLTSTAYDLGSSGFDVYTGYGLVDA YSAVQYALSLP
Specific function: Has a broad substrate specificity with a slight preference to large hydrophobic amino acid residues at the P1 position [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324576, Length=308, Percent_Identity=31.1688311688312, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320775, Length=317, Percent_Identity=31.2302839116719, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6319893, Length=256, Percent_Identity=33.984375, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 44143; Mature: 44143
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFNKYVLLIVLLALLLIPLVFSNESEALIVNGGSNKVRVVIGYRDESSRQNLLRNLGVS CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCC PVKEIRDLKVLVVEIPESLITRVKSLPGIRYIEKDIEARAFGISDYYGDIKWNMYMIGIT HHHHHHCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHEEECHHHCCCEEEEEEEEEHH DVWDYYYQYYGRYTFGRGVVVAVLDTGIDYTHPDLYGRVAYCIRTTGSTTYRGTSLSNCM HHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCHHHHEEEEEEEECCCCEECCCCHHHHH DRNGHGTHVAGIIAATINGAGVAGVAPNVTLIAVKVLYDSGSGSVTDIAEGIVEAVKAGA CCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCE YILSMSLGSSSDNSVLRDASNWAYQQGAIQIVAAGNSGDGNPSTDNVNYPARYPWVIAVA EEEEEECCCCCCCCHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEE AVDSNGNTPSWSSDGPEVDVAAPGVDILSTYLNKKYAYLSGTSMATPHVTGVVAVIEAMR EECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH YAAGKSWLGFDAIYKVLTSTAYDLGSSGFDVYTGYGLVDAYSAVQYALSLP HHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVFNKYVLLIVLLALLLIPLVFSNESEALIVNGGSNKVRVVIGYRDESSRQNLLRNLGVS CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCC PVKEIRDLKVLVVEIPESLITRVKSLPGIRYIEKDIEARAFGISDYYGDIKWNMYMIGIT HHHHHHCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHEEECHHHCCCEEEEEEEEEHH DVWDYYYQYYGRYTFGRGVVVAVLDTGIDYTHPDLYGRVAYCIRTTGSTTYRGTSLSNCM HHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCHHHHEEEEEEEECCCCEECCCCHHHHH DRNGHGTHVAGIIAATINGAGVAGVAPNVTLIAVKVLYDSGSGSVTDIAEGIVEAVKAGA CCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCE YILSMSLGSSSDNSVLRDASNWAYQQGAIQIVAAGNSGDGNPSTDNVNYPARYPWVIAVA EEEEEECCCCCCCCHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEE AVDSNGNTPSWSSDGPEVDVAAPGVDILSTYLNKKYAYLSGTSMATPHVTGVVAVIEAMR EECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH YAAGKSWLGFDAIYKVLTSTAYDLGSSGFDVYTGYGLVDAYSAVQYALSLP HHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11375149 [H]