Click here to switch to the map view.

The map label for this gene is 218884400

Identifier: 218884400

GI number: 218884400

Start: 1028130

End: 1028549

Strand: Reverse

Name: 218884400

Synonym: DKAM_1089

Alternate gene names: NA

Gene position: 1028549-1028130 (Counterclockwise)

Preceding gene: 218884401

Following gene: 218884393

Centisome position: 75.34

GC content: 39.52

Gene sequence:

>420_bases
ATGGAGTCATGGATTATATATGCATTGTTAGATGCTTTAGCGGCTGCATTGGCAACGATACTGGCTAAAATAGGCTTGCA
AAACGTTGACTCAATAACTGCGACAGCGCTTCGATCAATTGTAATGACTGTATTCGCTGTAAGCATAATGCTGTACTTCA
GGGGTGTAGCCTACGTAGGGAGAATGACGAGTATGGAATACATCTTCATAATTCTAAGCGGTGTGGCAGGCGGTCTTTCA
TGGATATTCTACTTTCTCGCACTACAAAAAGGTGATACATCTATTGTCGCAATGCTTGATAGATCCAGTATATTATTCAT
CATATTGTTTTCAGTTATACTACTCCATGAAGAACTTACATTGAAGAAGGCGATCTCGGTAGCCCTTATAGCTATTGCAC
TCTACCTTTTAATAATATAG

Upstream 100 bases:

>100_bases
GGCCTCTCAGCACCCCTAATATTCAGGTTCTTACCCGGATTCTCTCTTCATCGGTAATACTTATTAACAAAATAAAGCAT
ATGGCCTCATTGGTGTAAAA

Downstream 100 bases:

>100_bases
GAAAGCGATTGCGAAGCAACCTAGGGCGACTGGTTGTTTGCATGCATTCAGGATGAATGATTGAATATTACTGGCTCAAC
TATCCCTCTCCTTTCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MESWIIYALLDALAAALATILAKIGLQNVDSITATALRSIVMTVFAVSIMLYFRGVAYVGRMTSMEYIFIILSGVAGGLS
WIFYFLALQKGDTSIVAMLDRSSILFIILFSVILLHEELTLKKAISVALIAIALYLLII

Sequences:

>Translated_139_residues
MESWIIYALLDALAAALATILAKIGLQNVDSITATALRSIVMTVFAVSIMLYFRGVAYVGRMTSMEYIFIILSGVAGGLS
WIFYFLALQKGDTSIVAMLDRSSILFIILFSVILLHEELTLKKAISVALIAIALYLLII
>Mature_139_residues
MESWIIYALLDALAAALATILAKIGLQNVDSITATALRSIVMTVFAVSIMLYFRGVAYVGRMTSMEYIFIILSGVAGGLS
WIFYFLALQKGDTSIVAMLDRSSILFIILFSVILLHEELTLKKAISVALIAIALYLLII

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 15211; Mature: 15211

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWIIYALLDALAAALATILAKIGLQNVDSITATALRSIVMTVFAVSIMLYFRGVAYVG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMTSMEYIFIILSGVAGGLSWIFYFLALQKGDTSIVAMLDRSSILFIILFSVILLHEELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHCCCHHHHHHHHHHHHHHHHHH
LKKAISVALIAIALYLLII
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MESWIIYALLDALAAALATILAKIGLQNVDSITATALRSIVMTVFAVSIMLYFRGVAYVG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMTSMEYIFIILSGVAGGLSWIFYFLALQKGDTSIVAMLDRSSILFIILFSVILLHEELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHCCCHHHHHHHHHHHHHHHHHH
LKKAISVALIAIALYLLII
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]