Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884340

Identifier: 218884340

GI number: 218884340

Start: 977726

End: 978565

Strand: Direct

Name: 218884340

Synonym: DKAM_1029

Alternate gene names: NA

Gene position: 977726-978565 (Clockwise)

Preceding gene: 218884339

Following gene: 218884343

Centisome position: 71.62

GC content: 44.29

Gene sequence:

>840_bases
GTGTTTGATATACCTAGAGGCAAAGGTGGTCAGCGTAAAAACAGCAGGAGAAAAGATAAAGGGGAATCAACTCCTGCGAA
AACAGTCGTTGACGGTGGAAACCATTCTAGACCCAAGAAGGCTAAAAGCTCCTTTGACACCGGTAAAATAGTTGACGAAG
TACTTGATCAAGCATATATCTACCTAGGCTTAAGTGAGCTGGATATCGATGAGAAAATAGCTAAGTCCGTGGTGAGGGAG
GTAGTTGAAGCAGTTGTCTCCGGTTACTCGAGCAGACCCAGTCCTGATTCAGTATTGAAGAGGATTCAGCGTAACAGGGA
ACTGGTTAACGAGTATATAGCTGGGAAAATCCTTGAGTCAATCGAGAAACCTGGACCACTTACACTTGAATTCCTTATAG
CTAATGGTGGTAGAGCAGTGATTAAGGATGTATCTAGGCTCTACAAGTTAGCGGTGGAATATAATAAACCAGAGTTAATC
ATAACGCTTCAGAGCCTATGGAATAAGTATGGCCCTAAAGAAATGTTGAAGTGCCCGAGGTGTGGTTTTAATGGTATCTC
GCCAGAGTATTCTTGCGTAGTCTGCGGAGCCACCGTCTCGGAAAAGTATATTAGAGATAGTATAGGCTTCAGCGATAAAT
TCAACGCATACTTAAAGACAGCCAGTGTGGCGGAGCTACGTGAAGTATTACAGTTAGGCTTCATCCTGGTCGACTCGCTG
AGAGTATATGCCCCGAAGAGCCCTGAGGCTAGAGGCAGGGTTCTCTACCCTATTAGGTTAACCCGTGCCGAGATCAACTC
AATTATTGAGGAAATAAACAGCAGGGATGTAAGAATATAG

Upstream 100 bases:

>100_bases
AAATTAATACTAAGCTACCTAATAGGTAAGACACTTGAATTAAGGGAGGAAGTAGAAGGCTATACAGCAATATCTGACAA
AGCATAGTTTACCCGGAGGG

Downstream 100 bases:

>100_bases
GTTGAATACCCGGCTAGATACGTAGGCTAATGTTTAATTCTCTAAACACTTGCCTCAATCCTCTTCTCAGAACCTGTAGA
TTCAAGTCCGCCGTGCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFDIPRGKGGQRKNSRRKDKGESTPAKTVVDGGNHSRPKKAKSSFDTGKIVDEVLDQAYIYLGLSELDIDEKIAKSVVRE
VVEAVVSGYSSRPSPDSVLKRIQRNRELVNEYIAGKILESIEKPGPLTLEFLIANGGRAVIKDVSRLYKLAVEYNKPELI
ITLQSLWNKYGPKEMLKCPRCGFNGISPEYSCVVCGATVSEKYIRDSIGFSDKFNAYLKTASVAELREVLQLGFILVDSL
RVYAPKSPEARGRVLYPIRLTRAEINSIIEEINSRDVRI

Sequences:

>Translated_279_residues
MFDIPRGKGGQRKNSRRKDKGESTPAKTVVDGGNHSRPKKAKSSFDTGKIVDEVLDQAYIYLGLSELDIDEKIAKSVVRE
VVEAVVSGYSSRPSPDSVLKRIQRNRELVNEYIAGKILESIEKPGPLTLEFLIANGGRAVIKDVSRLYKLAVEYNKPELI
ITLQSLWNKYGPKEMLKCPRCGFNGISPEYSCVVCGATVSEKYIRDSIGFSDKFNAYLKTASVAELREVLQLGFILVDSL
RVYAPKSPEARGRVLYPIRLTRAEINSIIEEINSRDVRI
>Mature_279_residues
MFDIPRGKGGQRKNSRRKDKGESTPAKTVVDGGNHSRPKKAKSSFDTGKIVDEVLDQAYIYLGLSELDIDEKIAKSVVRE
VVEAVVSGYSSRPSPDSVLKRIQRNRELVNEYIAGKILESIEKPGPLTLEFLIANGGRAVIKDVSRLYKLAVEYNKPELI
ITLQSLWNKYGPKEMLKCPRCGFNGISPEYSCVVCGATVSEKYIRDSIGFSDKFNAYLKTASVAELREVLQLGFILVDSL
RVYAPKSPEARGRVLYPIRLTRAEINSIIEEINSRDVRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31186; Mature: 31186

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIPRGKGGQRKNSRRKDKGESTPAKTVVDGGNHSRPKKAKSSFDTGKIVDEVLDQAYI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
YLGLSELDIDEKIAKSVVREVVEAVVSGYSSRPSPDSVLKRIQRNRELVNEYIAGKILES
HHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKPGPLTLEFLIANGGRAVIKDVSRLYKLAVEYNKPELIITLQSLWNKYGPKEMLKCPR
HCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHCCCC
CGFNGISPEYSCVVCGATVSEKYIRDSIGFSDKFNAYLKTASVAELREVLQLGFILVDSL
CCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVYAPKSPEARGRVLYPIRLTRAEINSIIEEINSRDVRI
HHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDIPRGKGGQRKNSRRKDKGESTPAKTVVDGGNHSRPKKAKSSFDTGKIVDEVLDQAYI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
YLGLSELDIDEKIAKSVVREVVEAVVSGYSSRPSPDSVLKRIQRNRELVNEYIAGKILES
HHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKPGPLTLEFLIANGGRAVIKDVSRLYKLAVEYNKPELIITLQSLWNKYGPKEMLKCPR
HCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHCCCC
CGFNGISPEYSCVVCGATVSEKYIRDSIGFSDKFNAYLKTASVAELREVLQLGFILVDSL
CCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVYAPKSPEARGRVLYPIRLTRAEINSIIEEINSRDVRI
HHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA