Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884339

Identifier: 218884339

GI number: 218884339

Start: 977380

End: 977712

Strand: Direct

Name: 218884339

Synonym: DKAM_1028

Alternate gene names: NA

Gene position: 977380-977712 (Clockwise)

Preceding gene: 218884338

Following gene: 218884340

Centisome position: 71.59

GC content: 40.24

Gene sequence:

>333_bases
GTGAATATAGTGGCTAGAAGGAACAGTAGCGATGAAATGGCTGAGATAATTGAGAGAGTAGTTGGCGACATTATCGATGA
ACTCATAGAGAAATACTATAGTGATAAAGTAGATCAATATGTGGAGTACGAGGAATTACTAGTGAGGATAGCAAACGAGA
TCTCGCGCATAGTCTTCAAGGGGAAGGCTACTCCAGCTGAGATCGAAAGCTACCTCTATAAACTACGCGAGAAGAGGGGA
TATGCTAAATTAATACTAAGCTACCTAATAGGTAAGACACTTGAATTAAGGGAGGAAGTAGAAGGCTATACAGCAATATC
TGACAAAGCATAG

Upstream 100 bases:

>100_bases
GAGGGGCCATCTCGAGAGGATTCTTATAGAACCCGTACAGCCAGGTCGTTATTAAAGTATTTAATACACGTTAATCAATT
AGTCTCTCGTGATGACGTGG

Downstream 100 bases:

>100_bases
TTTACCCGGAGGGGTGTTTGATATACCTAGAGGCAAAGGTGGTCAGCGTAAAAACAGCAGGAGAAAAGATAAAGGGGAAT
CAACTCCTGCGAAAACAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNIVARRNSSDEMAEIIERVVGDIIDELIEKYYSDKVDQYVEYEELLVRIANEISRIVFKGKATPAEIESYLYKLREKRG
YAKLILSYLIGKTLELREEVEGYTAISDKA

Sequences:

>Translated_110_residues
MNIVARRNSSDEMAEIIERVVGDIIDELIEKYYSDKVDQYVEYEELLVRIANEISRIVFKGKATPAEIESYLYKLREKRG
YAKLILSYLIGKTLELREEVEGYTAISDKA
>Mature_110_residues
MNIVARRNSSDEMAEIIERVVGDIIDELIEKYYSDKVDQYVEYEELLVRIANEISRIVFKGKATPAEIESYLYKLREKRG
YAKLILSYLIGKTLELREEVEGYTAISDKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12786; Mature: 12786

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVARRNSSDEMAEIIERVVGDIIDELIEKYYSDKVDQYVEYEELLVRIANEISRIVFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKATPAEIESYLYKLREKRGYAKLILSYLIGKTLELREEVEGYTAISDKA
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIVARRNSSDEMAEIIERVVGDIIDELIEKYYSDKVDQYVEYEELLVRIANEISRIVFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKATPAEIESYLYKLREKRGYAKLILSYLIGKTLELREEVEGYTAISDKA
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA