| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884271
Identifier: 218884271
GI number: 218884271
Start: 908780
End: 909091
Strand: Reverse
Name: 218884271
Synonym: DKAM_0960
Alternate gene names: NA
Gene position: 909091-908780 (Counterclockwise)
Preceding gene: 218884272
Following gene: 218884270
Centisome position: 66.59
GC content: 42.31
Gene sequence:
>312_bases ATGGGCGAGCACTATCTAGGTACAACCGAGTTTGCTAGAATTCTTGATGTGTCTAGGGTTACTGTGATTAAGTGGATTAA GAGTGGTAGGATTACTGTTTATAATGTTAACGGTAGGTGGAGGATCCCGTATAGTGAGGTCGAGAGAGTTCTCAAATGTG TTCAAAGGATTAAGCGTGTAGCGATATACACTAGAGTATCTAGCAGTACACAGAGGAGTGATCTTGATAAACAGGTTGAA GCCCTCAAGCTCTGGGTCAGTAAGAATATTCCTCAAGCAGAGTACATAGTCGTCAGCGATAGTGGTTATTGA
Upstream 100 bases:
>100_bases GAAAACGCTGGAAACAACATTAGATTCAACTAACGCCGGATACGGGCTCCTACCTGTAGGCTATTGTAAATTTGTAGATA ACTTAGATACTTGGAGCATT
Downstream 100 bases:
>100_bases CAATGTTCATAAGGGTAAGAAGAGGCTGGTTGAGAAAACCAAGAAAAATAATTTGAAGCATAGACTGCACCAGTGGAGTA TTGTAAGACTCGTAGAGGTT
Product: ISC1913-like resolvase
Products: NA
Alternate protein names: Insertion Element Protein; IS Element ISTsi1 OrfA Resolvase
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGEHYLGTTEFARILDVSRVTVIKWIKSGRITVYNVNGRWRIPYSEVERVLKCVQRIKRVAIYTRVSSSTQRSDLDKQVE ALKLWVSKNIPQAEYIVVSDSGY
Sequences:
>Translated_103_residues MGEHYLGTTEFARILDVSRVTVIKWIKSGRITVYNVNGRWRIPYSEVERVLKCVQRIKRVAIYTRVSSSTQRSDLDKQVE ALKLWVSKNIPQAEYIVVSDSGY >Mature_102_residues GEHYLGTTEFARILDVSRVTVIKWIKSGRITVYNVNGRWRIPYSEVERVLKCVQRIKRVAIYTRVSSSTQRSDLDKQVEA LKLWVSKNIPQAEYIVVSDSGY
Specific function: Unknown
COG id: COG2452
COG function: function code L; Predicted site-specific integrase-resolvase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11950; Mature: 11819
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEHYLGTTEFARILDVSRVTVIKWIKSGRITVYNVNGRWRIPYSEVERVLKCVQRIKRV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHH AIYTRVSSSTQRSDLDKQVEALKLWVSKNIPQAEYIVVSDSGY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure GEHYLGTTEFARILDVSRVTVIKWIKSGRITVYNVNGRWRIPYSEVERVLKCVQRIKRV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHH AIYTRVSSSTQRSDLDKQVEALKLWVSKNIPQAEYIVVSDSGY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA