| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884270
Identifier: 218884270
GI number: 218884270
Start: 908452
End: 908790
Strand: Reverse
Name: 218884270
Synonym: DKAM_0959
Alternate gene names: NA
Gene position: 908790-908452 (Counterclockwise)
Preceding gene: 218884271
Following gene: 218884268
Centisome position: 66.57
GC content: 43.66
Gene sequence:
>339_bases GTGGTTATTGACAATGTTCATAAGGGTAAGAAGAGGCTGGTTGAGAAAACCAAGAAAAATAATTTGAAGCATAGACTGCA CCAGTGGAGTATTGTAAGACTCGTAGAGGTTTTAAACAGTGAGCCAGTACATGTTGTAGAGGTTTCAGAAGCATATCCGG CATCAAGAGACCCGTTCACAGGCAAACCCATAGCAAGATACACCCCCTCTGTGATCCGCATTGCGGTGAGAGGGTGGAAG AGGGTGAAAGTAGCTAAAGTCCTATTGAGACTAGCTAGGCTAGGTAATGGATTAACCCTAGATAGAGACGTTATTTTGGA GCTATTAACACCGGGTTAA
Upstream 100 bases:
>100_bases AGCAGTACACAGAGGAGTGATCTTGATAAACAGGTTGAAGCCCTCAAGCTCTGGGTCAGTAAGAATATTCCTCAAGCAGA GTACATAGTCGTCAGCGATA
Downstream 100 bases:
>100_bases GATATTTCTCCTCAGATAGGGCCCCGTGGCGTTGGGCTCGACCGAGCCCCATGCAGTCTAGGCGAAGCAAGTGAGCCCGG GCCAGGGGCTAACCCAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MVIDNVHKGKKRLVEKTKKNNLKHRLHQWSIVRLVEVLNSEPVHVVEVSEAYPASRDPFTGKPIARYTPSVIRIAVRGWK RVKVAKVLLRLARLGNGLTLDRDVILELLTPG
Sequences:
>Translated_112_residues MVIDNVHKGKKRLVEKTKKNNLKHRLHQWSIVRLVEVLNSEPVHVVEVSEAYPASRDPFTGKPIARYTPSVIRIAVRGWK RVKVAKVLLRLARLGNGLTLDRDVILELLTPG >Mature_112_residues MVIDNVHKGKKRLVEKTKKNNLKHRLHQWSIVRLVEVLNSEPVHVVEVSEAYPASRDPFTGKPIARYTPSVIRIAVRGWK RVKVAKVLLRLARLGNGLTLDRDVILELLTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12747; Mature: 12747
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIDNVHKGKKRLVEKTKKNNLKHRLHQWSIVRLVEVLNSEPVHVVEVSEAYPASRDPFT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC GKPIARYTPSVIRIAVRGWKRVKVAKVLLRLARLGNGLTLDRDVILELLTPG CCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MVIDNVHKGKKRLVEKTKKNNLKHRLHQWSIVRLVEVLNSEPVHVVEVSEAYPASRDPFT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC GKPIARYTPSVIRIAVRGWKRVKVAKVLLRLARLGNGLTLDRDVILELLTPG CCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA