Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884179

Identifier: 218884179

GI number: 218884179

Start: 833903

End: 834592

Strand: Direct

Name: 218884179

Synonym: DKAM_0868

Alternate gene names: NA

Gene position: 833903-834592 (Clockwise)

Preceding gene: 218884175

Following gene: 218884180

Centisome position: 61.08

GC content: 44.35

Gene sequence:

>690_bases
ATGCCCAGGGGAAACACGAGTGTAAGCAACATTGTGAGGGAGATCGTCGAGAGTGATCCATGCCTAGTGGAAGCATTGAG
TAATGGATACGTGAACTATAGCAAGCTATCGGAGAGGCTTGCCGAAGTTATCAGAGAGGAGTATGGGGTGTCATGTACAC
CTAGTTCCATTAAAATGTCGCTACTGCGCAGCAGGAGCAGTGTAGCTAGGCAATCCCTTAAGTCAAGGATCTTTAGGGTT
CTAGCCAGGAGCAGTATAGAGCTTAAGACAGGCCTAGCTATAGTGACATATGATTATACAGTACTCCACAAGGTGTTCAA
GAGCGTTCATGAGCTAGCTGGCAGGACACGCTTCATATCTATCTCGCAGGGCATAGACAATATAACTATAATAGTGAACA
CTGAGTTACTAGATGACTTAGTTGGCCTGATGGATAAGGAGCCGGTGTGGCTTGAGAGAGATGTCTCGGCAATCATAATA
GTAAGCCCAATCGAGAATATTGAGACACCGGGCTTCATATCCTATATAACAACACTCCTAGCCAGGAAAGGAATCAACAT
ACTCCAAATAATGTCAGCTCACAGTGACACCATCATAGTAATCGATAGAAAAGACTCTGTGGAGGCATTTAAAACACTGG
AGTCAATAATATTGAAAGCCAAGGAGGATAGCAAGGAGCCCTTGAAATAA

Upstream 100 bases:

>100_bases
CATGGAACAGAGATAAAAACTTTTTTACATATATGAAACATTTTAAAAAGAAGTGTTACATTTTGGAATATATTTGTTAC
ATTTAGTCGTAGGTGGTGCC

Downstream 100 bases:

>100_bases
ATGGGTGAATACAGTTGGCCTCGGCACTCAGCAGGGGTTCGATACCATCCCTGGATTAATCTCCAGCAGTAGAAGATGGC
TTTTTGTTTCACTATGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPRGNTSVSNIVREIVESDPCLVEALSNGYVNYSKLSERLAEVIREEYGVSCTPSSIKMSLLRSRSSVARQSLKSRIFRV
LARSSIELKTGLAIVTYDYTVLHKVFKSVHELAGRTRFISISQGIDNITIIVNTELLDDLVGLMDKEPVWLERDVSAIII
VSPIENIETPGFISYITTLLARKGINILQIMSAHSDTIIVIDRKDSVEAFKTLESIILKAKEDSKEPLK

Sequences:

>Translated_229_residues
MPRGNTSVSNIVREIVESDPCLVEALSNGYVNYSKLSERLAEVIREEYGVSCTPSSIKMSLLRSRSSVARQSLKSRIFRV
LARSSIELKTGLAIVTYDYTVLHKVFKSVHELAGRTRFISISQGIDNITIIVNTELLDDLVGLMDKEPVWLERDVSAIII
VSPIENIETPGFISYITTLLARKGINILQIMSAHSDTIIVIDRKDSVEAFKTLESIILKAKEDSKEPLK
>Mature_228_residues
PRGNTSVSNIVREIVESDPCLVEALSNGYVNYSKLSERLAEVIREEYGVSCTPSSIKMSLLRSRSSVARQSLKSRIFRVL
ARSSIELKTGLAIVTYDYTVLHKVFKSVHELAGRTRFISISQGIDNITIIVNTELLDDLVGLMDKEPVWLERDVSAIIIV
SPIENIETPGFISYITTLLARKGINILQIMSAHSDTIIVIDRKDSVEAFKTLESIILKAKEDSKEPLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25568; Mature: 25437

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGNTSVSNIVREIVESDPCLVEALSNGYVNYSKLSERLAEVIREEYGVSCTPSSIKMS
CCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLRSRSSVARQSLKSRIFRVLARSSIELKTGLAIVTYDYTVLHKVFKSVHELAGRTRFIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEECHHHHHHHHHHHHHHCCCCEEEE
ISQGIDNITIIVNTELLDDLVGLMDKEPVWLERDVSAIIIVSPIENIETPGFISYITTLL
ECCCCCEEEEEEEHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHH
ARKGINILQIMSAHSDTIIVIDRKDSVEAFKTLESIILKAKEDSKEPLK
HHCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PRGNTSVSNIVREIVESDPCLVEALSNGYVNYSKLSERLAEVIREEYGVSCTPSSIKMS
CCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLRSRSSVARQSLKSRIFRVLARSSIELKTGLAIVTYDYTVLHKVFKSVHELAGRTRFIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEEEECHHHHHHHHHHHHHHCCCCEEEE
ISQGIDNITIIVNTELLDDLVGLMDKEPVWLERDVSAIIIVSPIENIETPGFISYITTLL
ECCCCCEEEEEEEHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHH
ARKGINILQIMSAHSDTIIVIDRKDSVEAFKTLESIILKAKEDSKEPLK
HHCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA