Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884133

Identifier: 218884133

GI number: 218884133

Start: 791052

End: 791951

Strand: Direct

Name: 218884133

Synonym: DKAM_0822

Alternate gene names: NA

Gene position: 791052-791951 (Clockwise)

Preceding gene: 218884132

Following gene: 218884134

Centisome position: 57.94

GC content: 41.78

Gene sequence:

>900_bases
ATGATAACACATGAGGTTTTAATGAATGCTATAGCATTACTTAACAACGGGGTCAGCCTCAACATTGTTTCGAAAACCCT
TGGTGTTAATAGAACCCAGTTGTCAAGGCACCTGAATACGTTAATTAAGAAGAATCTACTGGTTAAATACCTGAATGTCT
TTATAGATCGCCTGCAAACACCTGTTTCCATAGTTATTGGGGAACTTAAGCAGAAGGCAACGGGCCTGAGGTGTCTTCTC
GGAAACCCTCCTTTAATTATATCTTATTACTCGTATACATCGCGTCCAACCATTATAAGTTATGTGAGAGACGACTATAG
CGGGATAGATGCCAGATCTATAGCTGCTGATGCATGTAGGATCGTGTTTTACGGTAGAATATCACAGGTATTAGTACCTA
TACAAGTGGTTCAAAACCCCGGGTTTACACTCCTGGAGTCCAGCGTATTCATTGATAAGGATATATTACTTGATGAGGCA
GATGAAGTGATAGCCCTCGAGTTATTCAGGCTCTTTAACCCCTGTATATTTGGCAGGTGGAGAACAAGTGACCTGGTTGG
AACCCTTAAGAAGAGCCTTGGGGCAAGGGATACATACCACCATTTCACCAGACATGCCGTGGCCTTAACACGCAAGAAAT
ATGTTTATAAAGACAGTGGCATGTACTCCCTAATATTCGTATCATCTGATACGCTTGACGCTCTAGCAGCATTGCTGAGT
CAGCTACATGAATCCCAGATACTTATAGACGTGGAGCAAGCAAACATGGTGAGCACTTATCCATTCATTGGCGTAATTCA
TGCATGGATATCCCTGGATAAGCTGTATGATTATAATAAGGGGCATGATTTAATCGAGGGTGTTTCATATGCTATTTACC
CGGTTTTCTCAGTTCACTAA

Upstream 100 bases:

>100_bases
AGAATAAATAATGTTCAAACAGAGGCGAGATATATCTGGGAGTTACTTGTTAAGTCACTGGGTTGAAACCACTATTGAAT
GAGACGGGAGAGGTATATTA

Downstream 100 bases:

>100_bases
TCTGGTAACATTTATGCTCCATAATTCTTTCAGTTCCAATATTCCAGGTATTAATCAAGAGAAATTTATTTTTAGGGCTT
AAATAGTGTAATAATGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MITHEVLMNAIALLNNGVSLNIVSKTLGVNRTQLSRHLNTLIKKNLLVKYLNVFIDRLQTPVSIVIGELKQKATGLRCLL
GNPPLIISYYSYTSRPTIISYVRDDYSGIDARSIAADACRIVFYGRISQVLVPIQVVQNPGFTLLESSVFIDKDILLDEA
DEVIALELFRLFNPCIFGRWRTSDLVGTLKKSLGARDTYHHFTRHAVALTRKKYVYKDSGMYSLIFVSSDTLDALAALLS
QLHESQILIDVEQANMVSTYPFIGVIHAWISLDKLYDYNKGHDLIEGVSYAIYPVFSVH

Sequences:

>Translated_299_residues
MITHEVLMNAIALLNNGVSLNIVSKTLGVNRTQLSRHLNTLIKKNLLVKYLNVFIDRLQTPVSIVIGELKQKATGLRCLL
GNPPLIISYYSYTSRPTIISYVRDDYSGIDARSIAADACRIVFYGRISQVLVPIQVVQNPGFTLLESSVFIDKDILLDEA
DEVIALELFRLFNPCIFGRWRTSDLVGTLKKSLGARDTYHHFTRHAVALTRKKYVYKDSGMYSLIFVSSDTLDALAALLS
QLHESQILIDVEQANMVSTYPFIGVIHAWISLDKLYDYNKGHDLIEGVSYAIYPVFSVH
>Mature_299_residues
MITHEVLMNAIALLNNGVSLNIVSKTLGVNRTQLSRHLNTLIKKNLLVKYLNVFIDRLQTPVSIVIGELKQKATGLRCLL
GNPPLIISYYSYTSRPTIISYVRDDYSGIDARSIAADACRIVFYGRISQVLVPIQVVQNPGFTLLESSVFIDKDILLDEA
DEVIALELFRLFNPCIFGRWRTSDLVGTLKKSLGARDTYHHFTRHAVALTRKKYVYKDSGMYSLIFVSSDTLDALAALLS
QLHESQILIDVEQANMVSTYPFIGVIHAWISLDKLYDYNKGHDLIEGVSYAIYPVFSVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33660; Mature: 33660

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITHEVLMNAIALLNNGVSLNIVSKTLGVNRTQLSRHLNTLIKKNLLVKYLNVFIDRLQT
CCCHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVSIVIGELKQKATGLRCLLGNPPLIISYYSYTSRPTIISYVRDDYSGIDARSIAADACR
CHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHH
IVFYGRISQVLVPIQVVQNPGFTLLESSVFIDKDILLDEADEVIALELFRLFNPCIFGRW
HHHHHHHHHHHHHHHHHCCCCCEEEECCEEECHHHHHCCCHHHHHHHHHHHHCHHHCCCC
RTSDLVGTLKKSLGARDTYHHFTRHAVALTRKKYVYKDSGMYSLIFVSSDTLDALAALLS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCHHHHHHHHH
QLHESQILIDVEQANMVSTYPFIGVIHAWISLDKLYDYNKGHDLIEGVSYAIYPVFSVH
HHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHEEEEEECC
>Mature Secondary Structure
MITHEVLMNAIALLNNGVSLNIVSKTLGVNRTQLSRHLNTLIKKNLLVKYLNVFIDRLQT
CCCHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVSIVIGELKQKATGLRCLLGNPPLIISYYSYTSRPTIISYVRDDYSGIDARSIAADACR
CHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHH
IVFYGRISQVLVPIQVVQNPGFTLLESSVFIDKDILLDEADEVIALELFRLFNPCIFGRW
HHHHHHHHHHHHHHHHHCCCCCEEEECCEEECHHHHHCCCHHHHHHHHHHHHCHHHCCCC
RTSDLVGTLKKSLGARDTYHHFTRHAVALTRKKYVYKDSGMYSLIFVSSDTLDALAALLS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCHHHHHHHHH
QLHESQILIDVEQANMVSTYPFIGVIHAWISLDKLYDYNKGHDLIEGVSYAIYPVFSVH
HHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA