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The map label for this gene is 218883780

Identifier: 218883780

GI number: 218883780

Start: 438140

End: 439495

Strand: Reverse

Name: 218883780

Synonym: DKAM_0469

Alternate gene names: NA

Gene position: 439495-438140 (Counterclockwise)

Preceding gene: 218883781

Following gene: 218883779

Centisome position: 32.19

GC content: 50.07

Gene sequence:

>1356_bases
GTGGAGGGCATTAGGCTCCACATAGGGTTAGATGACATTGATTCCCCCACGGGTGGCTGTACAACACATATAGCTGTCCA
AATAGTCCACGAGCTCTCAGGCAAAGGGAACATATGGTTCACAGACTACTTGAACCTCATCAGGCTGAACCCGGCTGTTC
CATGGAAGACCAGGGGAAACGGCGCCGTCGCTATAAGGCTAAGCGTCGCTAGTGAAAGCGATCTAGTGGATGTTATTGAA
CACGTGGAGAACAAGGTCGATGAATACGTGGCTGAATACTCTAACCCCAAGCACCAGCCCTCACTAGTATTCCTTATAGG
GGATGTACCAGGGTTCCTGGAGAAGTATGGGGAGAAAGCACTATACGACTTCATCCCATTAGACTACGCTCTAAGAGTAA
TTGGGAGGCTAGGCGAGAGGATACGGGTTCATGCTCCAAGGGGTAGGAGAGGCGTGATAGGCGCCTTAGCAGCCATAGGC
ATCCAGATGCTCAGTGGAGACTATACATATGAGTTGATAGCCTATAGGACGCGTGAATACATTGGTAAACCCAGGATGAT
CGATGAAAACAGTATAATGGAAATGGATAAGGCGACCCAGGGGAAAACAATACTCAACTACGACCACGAGTCGAAACGCT
CCTTGATAATCCCAAGGGGCCCGGATCCCGTTCTCTACGGGATTAGAGGAGAGTATCCATGGGACCTCATAGATGCGTCT
AAATACCTCAGAGTGTTTGAACCAGTGGAATACATGGCTGTCTTCCGGACAAACCAGCACACTGATAGCCATCTACATCC
GGTGGATACAGTGTGTGATGTACACCCATATATGTGTGTGAGGCTGACTGGTACTGTCTCATCGAAGCCCCGGCGTATAC
AAGGAGGGCACCTTGTCTTCAAGGTATGTAACGAGTGCTGTATGGATGTAGCAGTCTACGAGCCAACGAAACGTTTCAGG
GATGTAGTGGAGAAGCTGGAACCTGGTGACAAGGTGGAGGTGATGGGGTGTGTGAGACCTGGGAGTAGGTCCCATGGAGC
AACATTAAACCTAGAGAAGATATGCGTGATAGAGCTGGCTCGGAAAACCATTAAGTTGAACCCATTATGTCCCAAATGCG
GTAGGAGGATGGAGAGCGCTGGGAAGGGTAAGGGGTTTAAGTGCAGGCACTGCGGCTATAAGAGCCTGGAGCTCAGTAAG
GAGGAGATAGTGGTGCCTAGAGATATTCAAGCCATGTGCTACCAGCCACCGCTCCACGTGTTTAAGCATGTTATGCGGCC
ATTGGGGAGGCCTGTAGTACACAGGGTTTTTACGGGGAGCGAGCTAATCACACCTTTTGTCTGGAAACTATCGTAG

Upstream 100 bases:

>100_bases
GCCTACGGGTAAGCATATAGTAGTATACGCTGATGCAACGATAACGCTACCCCTGATAGTAGGAGGTATGCTATGCCTCG
CTAGGAAAGGGGGCTAGGTA

Downstream 100 bases:

>100_bases
GATCACGGGATCATTGCTGCCATATCTAACTGGTTGGATTGAATGATTCTTTTATAAGAACATATTTGTGGAGTCCTGGT
TAAATGTGTTTATATATTTA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MEGIRLHIGLDDIDSPTGGCTTHIAVQIVHELSGKGNIWFTDYLNLIRLNPAVPWKTRGNGAVAIRLSVASESDLVDVIE
HVENKVDEYVAEYSNPKHQPSLVFLIGDVPGFLEKYGEKALYDFIPLDYALRVIGRLGERIRVHAPRGRRGVIGALAAIG
IQMLSGDYTYELIAYRTREYIGKPRMIDENSIMEMDKATQGKTILNYDHESKRSLIIPRGPDPVLYGIRGEYPWDLIDAS
KYLRVFEPVEYMAVFRTNQHTDSHLHPVDTVCDVHPYMCVRLTGTVSSKPRRIQGGHLVFKVCNECCMDVAVYEPTKRFR
DVVEKLEPGDKVEVMGCVRPGSRSHGATLNLEKICVIELARKTIKLNPLCPKCGRRMESAGKGKGFKCRHCGYKSLELSK
EEIVVPRDIQAMCYQPPLHVFKHVMRPLGRPVVHRVFTGSELITPFVWKLS

Sequences:

>Translated_451_residues
MEGIRLHIGLDDIDSPTGGCTTHIAVQIVHELSGKGNIWFTDYLNLIRLNPAVPWKTRGNGAVAIRLSVASESDLVDVIE
HVENKVDEYVAEYSNPKHQPSLVFLIGDVPGFLEKYGEKALYDFIPLDYALRVIGRLGERIRVHAPRGRRGVIGALAAIG
IQMLSGDYTYELIAYRTREYIGKPRMIDENSIMEMDKATQGKTILNYDHESKRSLIIPRGPDPVLYGIRGEYPWDLIDAS
KYLRVFEPVEYMAVFRTNQHTDSHLHPVDTVCDVHPYMCVRLTGTVSSKPRRIQGGHLVFKVCNECCMDVAVYEPTKRFR
DVVEKLEPGDKVEVMGCVRPGSRSHGATLNLEKICVIELARKTIKLNPLCPKCGRRMESAGKGKGFKCRHCGYKSLELSK
EEIVVPRDIQAMCYQPPLHVFKHVMRPLGRPVVHRVFTGSELITPFVWKLS
>Mature_451_residues
MEGIRLHIGLDDIDSPTGGCTTHIAVQIVHELSGKGNIWFTDYLNLIRLNPAVPWKTRGNGAVAIRLSVASESDLVDVIE
HVENKVDEYVAEYSNPKHQPSLVFLIGDVPGFLEKYGEKALYDFIPLDYALRVIGRLGERIRVHAPRGRRGVIGALAAIG
IQMLSGDYTYELIAYRTREYIGKPRMIDENSIMEMDKATQGKTILNYDHESKRSLIIPRGPDPVLYGIRGEYPWDLIDAS
KYLRVFEPVEYMAVFRTNQHTDSHLHPVDTVCDVHPYMCVRLTGTVSSKPRRIQGGHLVFKVCNECCMDVAVYEPTKRFR
DVVEKLEPGDKVEVMGCVRPGSRSHGATLNLEKICVIELARKTIKLNPLCPKCGRRMESAGKGKGFKCRHCGYKSLELSK
EEIVVPRDIQAMCYQPPLHVFKHVMRPLGRPVVHRVFTGSELITPFVWKLS

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF08489 DUF1743; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 50922; Mature: 50922

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIRLHIGLDDIDSPTGGCTTHIAVQIVHELSGKGNIWFTDYLNLIRLNPAVPWKTRGN
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEHEECCCCCCCEECCC
GAVAIRLSVASESDLVDVIEHVENKVDEYVAEYSNPKHQPSLVFLIGDVPGFLEKYGEKA
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCHH
LYDFIPLDYALRVIGRLGERIRVHAPRGRRGVIGALAAIGIQMLSGDYTYELIAYRTREY
HHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
IGKPRMIDENSIMEMDKATQGKTILNYDHESKRSLIIPRGPDPVLYGIRGEYPWDLIDAS
CCCCCEECCCCHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHH
KYLRVFEPVEYMAVFRTNQHTDSHLHPVDTVCDVHPYMCVRLTGTVSSKPRRIQGGHLVF
HHHHHHCHHHHHHHEECCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCEECCCCHHH
KVCNECCMDVAVYEPTKRFRDVVEKLEPGDKVEVMGCVRPGSRSHGATLNLEKICVIELA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEECHHHHHHHHHH
RKTIKLNPLCPKCGRRMESAGKGKGFKCRHCGYKSLELSKEEIVVPRDIQAMCYQPPLHV
HHHEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHEECCCCHHHHHCCCHHHH
FKHVMRPLGRPVVHRVFTGSELITPFVWKLS
HHHHHHHHCHHHHHHHHCCCHHHCCEEEECC
>Mature Secondary Structure
MEGIRLHIGLDDIDSPTGGCTTHIAVQIVHELSGKGNIWFTDYLNLIRLNPAVPWKTRGN
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEHEECCCCCCCEECCC
GAVAIRLSVASESDLVDVIEHVENKVDEYVAEYSNPKHQPSLVFLIGDVPGFLEKYGEKA
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCHH
LYDFIPLDYALRVIGRLGERIRVHAPRGRRGVIGALAAIGIQMLSGDYTYELIAYRTREY
HHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
IGKPRMIDENSIMEMDKATQGKTILNYDHESKRSLIIPRGPDPVLYGIRGEYPWDLIDAS
CCCCCEECCCCHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHH
KYLRVFEPVEYMAVFRTNQHTDSHLHPVDTVCDVHPYMCVRLTGTVSSKPRRIQGGHLVF
HHHHHHCHHHHHHHEECCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCEECCCCHHH
KVCNECCMDVAVYEPTKRFRDVVEKLEPGDKVEVMGCVRPGSRSHGATLNLEKICVIELA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEECHHHHHHHHHH
RKTIKLNPLCPKCGRRMESAGKGKGFKCRHCGYKSLELSKEEIVVPRDIQAMCYQPPLHV
HHHEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHEECCCCHHHHHCCCHHHH
FKHVMRPLGRPVVHRVFTGSELITPFVWKLS
HHHHHHHHCHHHHHHHHCCCHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]