| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883761
Identifier: 218883761
GI number: 218883761
Start: 420424
End: 421632
Strand: Reverse
Name: 218883761
Synonym: DKAM_0450
Alternate gene names: NA
Gene position: 421632-420424 (Counterclockwise)
Preceding gene: 218883762
Following gene: 218883759
Centisome position: 30.88
GC content: 47.15
Gene sequence:
>1209_bases TTGACCACCATTGACGCTAGGAGGCAGTGGTTAAACAGGTGGATCTATCACTCCATCCTATACAGTCTAGCCGTGACGCT CCCCTCCATCTTCTACCAGGCATACGCCATCAGGGCACTAGGGTTCACGGTTGATGAGGTTGGATCCCTTACCTTCATAA ATATCTCGGCGATAGCACTTGGAAACCTCACCGGTCTCCCACTGGTCTACAGGTACAGGGATAGAAGGGTAACAATATGG AAGACGTTTACATCGCTTAACCTGTTATCTTGGAGCCTCTCCGGTTTCACCGATATAGCAGGGGTTAAACCATTATTCCC ACTAAGCATAGGGGTGGCACAGTATACGGGCTCTATCGGTGGACTAGCCTATTCAGATACTATAGCCGATGTCGTGTCAA GGGATGAGTCTATAAGGTTATTCAGCAAGGTGAACATGTTTACAACCACGGCTGCACTCATCGGTCTCGTCTTAAGCATC ATCGTCTTCCATGCCATTAATAACGTGAAGCTAGCCTACAGAATATGCTATGCTATCTCCTTGCTAGCTGCATTAATCTC TATAGGCTTCCTGGCATCGCTGTGGGAGATGAGTAAAAAGCCTCCCCAGAGGATAGGGCCCTGGTTAATGGCGTCCAAGT TCAAGAGTGTCATGAATGCCTATGCCCCGAGGAACTATGTGTCATTCATGCTCCTCCTCACGTTCTCCGTTAACCTTCCA TCCGCGCTCTGGAACTACTACCTCATCAAGGTATTCCATGGTGATGAGACATGGATATCCCTGGGCAATGTCTCAAGCAC ATTGGCATCTATACTAGGCAACTATGTGGTGGGTAGGATGCATTACAGGATGAAGCCTAGGAGAGTGATGATTCTTGCGG TTCTCCCTATTTCAAGCCTCCCACTTGTATATCTTTTCTCACCGACCCTGCCTCTACAAATACTCTTCAACATATACTCT GGTTTCTCATGGGCTTTTTTCAATAATATGTCCAACATCTATAACTTATACCTGGTCGGCATAGATGACAGGATATACTT CCTAACAATGCTCGGCATCGCTAACAATGTGTCGGCATCGATAGCGTCTAAGACCGGCTCCTTCATAGCCTCAATGGGTT TAGAGTACATGAAGCTGGTCTTCATTGCCTCCTCATGTCTTAGACTCTCATCGTTCTTCTACGCTGTTAAGAGGGTGAGG GATCTCTAG
Upstream 100 bases:
>100_bases CTGGGAAGCATAGTCGAGGAGCTGTCCAGGAGAATCAGGGAAACCATACCTGACGCCATTATTGAAACCTAGCCAAGGAA TCGCTGAAGAGTGATCTAGT
Downstream 100 bases:
>100_bases CCACCGTAGAGCGTTGACAATGCTATCGATACACCAACCAGTATTGTTCCAGCTACCTCCTCCATCATTATTCCTTTCCC TGATACCTTGGAGCTTATCA
Product: Permeases of the major facilitator superfamily protein
Products: NA
Alternate protein names: Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTTIDARRQWLNRWIYHSILYSLAVTLPSIFYQAYAIRALGFTVDEVGSLTFINISAIALGNLTGLPLVYRYRDRRVTIW KTFTSLNLLSWSLSGFTDIAGVKPLFPLSIGVAQYTGSIGGLAYSDTIADVVSRDESIRLFSKVNMFTTTAALIGLVLSI IVFHAINNVKLAYRICYAISLLAALISIGFLASLWEMSKKPPQRIGPWLMASKFKSVMNAYAPRNYVSFMLLLTFSVNLP SALWNYYLIKVFHGDETWISLGNVSSTLASILGNYVVGRMHYRMKPRRVMILAVLPISSLPLVYLFSPTLPLQILFNIYS GFSWAFFNNMSNIYNLYLVGIDDRIYFLTMLGIANNVSASIASKTGSFIASMGLEYMKLVFIASSCLRLSSFFYAVKRVR DL
Sequences:
>Translated_402_residues MTTIDARRQWLNRWIYHSILYSLAVTLPSIFYQAYAIRALGFTVDEVGSLTFINISAIALGNLTGLPLVYRYRDRRVTIW KTFTSLNLLSWSLSGFTDIAGVKPLFPLSIGVAQYTGSIGGLAYSDTIADVVSRDESIRLFSKVNMFTTTAALIGLVLSI IVFHAINNVKLAYRICYAISLLAALISIGFLASLWEMSKKPPQRIGPWLMASKFKSVMNAYAPRNYVSFMLLLTFSVNLP SALWNYYLIKVFHGDETWISLGNVSSTLASILGNYVVGRMHYRMKPRRVMILAVLPISSLPLVYLFSPTLPLQILFNIYS GFSWAFFNNMSNIYNLYLVGIDDRIYFLTMLGIANNVSASIASKTGSFIASMGLEYMKLVFIASSCLRLSSFFYAVKRVR DL >Mature_401_residues TTIDARRQWLNRWIYHSILYSLAVTLPSIFYQAYAIRALGFTVDEVGSLTFINISAIALGNLTGLPLVYRYRDRRVTIWK TFTSLNLLSWSLSGFTDIAGVKPLFPLSIGVAQYTGSIGGLAYSDTIADVVSRDESIRLFSKVNMFTTTAALIGLVLSII VFHAINNVKLAYRICYAISLLAALISIGFLASLWEMSKKPPQRIGPWLMASKFKSVMNAYAPRNYVSFMLLLTFSVNLPS ALWNYYLIKVFHGDETWISLGNVSSTLASILGNYVVGRMHYRMKPRRVMILAVLPISSLPLVYLFSPTLPLQILFNIYSG FSWAFFNNMSNIYNLYLVGIDDRIYFLTMLGIANNVSASIASKTGSFIASMGLEYMKLVFIASSCLRLSSFFYAVKRVRD L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45138; Mature: 45007
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDARRQWLNRWIYHSILYSLAVTLPSIFYQAYAIRALGFTVDEVGSLTFINISAIAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEEE GNLTGLPLVYRYRDRRVTIWKTFTSLNLLSWSLSGFTDIAGVKPLFPLSIGVAQYTGSIG CCCCCCCEEEEECCCEEEEEEEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHCCCCC GLAYSDTIADVVSRDESIRLFSKVNMFTTTAALIGLVLSIIVFHAINNVKLAYRICYAIS CEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLAALISIGFLASLWEMSKKPPQRIGPWLMASKFKSVMNAYAPRNYVSFMLLLTFSVNLP HHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC SALWNYYLIKVFHGDETWISLGNVSSTLASILGNYVVGRMHYRMKPRRVMILAVLPISSL HHHHHEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC PLVYLFSPTLPLQILFNIYSGFSWAFFNNMSNIYNLYLVGIDDRIYFLTMLGIANNVSAS CEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEECCCEEHHHHHHHHCCCHHH IASKTGSFIASMGLEYMKLVFIASSCLRLSSFFYAVKRVRDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTIDARRQWLNRWIYHSILYSLAVTLPSIFYQAYAIRALGFTVDEVGSLTFINISAIAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEEE GNLTGLPLVYRYRDRRVTIWKTFTSLNLLSWSLSGFTDIAGVKPLFPLSIGVAQYTGSIG CCCCCCCEEEEECCCEEEEEEEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHCCCCC GLAYSDTIADVVSRDESIRLFSKVNMFTTTAALIGLVLSIIVFHAINNVKLAYRICYAIS CEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLAALISIGFLASLWEMSKKPPQRIGPWLMASKFKSVMNAYAPRNYVSFMLLLTFSVNLP HHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC SALWNYYLIKVFHGDETWISLGNVSSTLASILGNYVVGRMHYRMKPRRVMILAVLPISSL HHHHHEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC PLVYLFSPTLPLQILFNIYSGFSWAFFNNMSNIYNLYLVGIDDRIYFLTMLGIANNVSAS CEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEECCCEEHHHHHHHHCCCHHH IASKTGSFIASMGLEYMKLVFIASSCLRLSSFFYAVKRVRDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA