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The map label for this gene is 218883758

Identifier: 218883758

GI number: 218883758

Start: 417219

End: 418571

Strand: Reverse

Name: 218883758

Synonym: DKAM_0447

Alternate gene names: NA

Gene position: 418571-417219 (Counterclockwise)

Preceding gene: 218883759

Following gene: 218883757

Centisome position: 30.66

GC content: 47.15

Gene sequence:

>1353_bases
TTGGTTAGAAACCCATTGCTATTTTTTGCACTAGTCATCGTAGTGGCACTACTCATTCAAGTCATCTCCATCAGTGGTGA
TAATAGCCAAGCATACACAAGGACTATAAATCAAGCCATAGTACTCGATATAACCCCGCCCTTCGACACCATAGACACTG
GTATAGCTGAGTGCTTTATGGATGCCTTAAGGGAGGCCGAGTCCACCGGCTCACTCTTGATCTACCGTGTAAACTCGTAT
GGCGGCCTCCTGGACGCTGGCTTCACAATAGGTGATGCAGTATTATACTCTAAGACGCCTACTGTAGCCTACGTGGAGAC
CAAGGCTTTAAGCGCTGCCACACTGATAATACTGCCGGCTAATATTATTGCCCTACAGAGGTATTCAACCATAGGCGATA
TGCAGCCCGTGATGGTTGATCCATTAACAGGTCAGATACAGTTCATCAATGAACCCAAGATACTTAACCCGATAATAGAG
AAGGCTAAGACCTATGCGAGCAGGAGTAATAGGAATCAAACCATAATCGAGGAGTTCGTAACCCATGCATTAACCATCAA
CTCCTCCCTCGCTATTGCTAGCAGGGTGGCTGATCTAGAGGTGGAGAACTTCGATGAACTACTCACCACATTGAATGGGG
CGCATGTGAGAATCGGCGACACTGAGTACGTGTTAAACATAGATAGGGGAATGATGAAGACTTTCTCCTGTAGTATAAGG
TCTCGCATAATATCCATTCTCTCAAACTCATATATAGCGAATATACTTACCACGATAGGAATGCTCGCCACGATCTTCGC
TCTTGTCTCAGGCAAGCTTGCCATACTCCCGTTGACAATAGGGATGCTGCTCCTAGGCCTCGTCGGCACCGGGTTCAGTG
CTAACATGGTTTCAGCCTTCCTCATAATCCTTGGAGCATTACTGCTAGCTCTAGAGCTCTTCGTTATACCCGGGTTCGGC
GTGGTTGGTGTAAGCGGGATAATATTGTTGACGCTGGGATTCGCGCTGCTACCGGTCTATGTTCCCACAGGAGTCTCGCC
GAGTGGTGAATATATTGCTGTCTTAAGGCTATATATATTAGTGATCTCCCTGTTTTTGGGCGGGGTATTCGGCATCGTTA
TATATAAGGTGGCTAAGGTGAGGCGTAAGAAACCCGTGGAGTTTCTCCCGGTTAGTAAGAAAGGCAGGGCAATTGACGAG
TTAAAGCCTGGATCCATAGGCTTTGTGGTGGTCGAGGGAGAGTACTGGAGGGCTGTATCAAACGAGTATATTGCGCCAGG
TGAGGAGGTAATTGTGGAGGAGATGCTGGAGAATGGTGTTCTAAGGGTTAGAAAAAAGACTGATAACCACTAG

Upstream 100 bases:

>100_bases
GTTGTAACCGAGTCCTCGGCTTCACCAACGGGCTCTATGATTGGAGTATATAAGGCTCTAAAAGAGAAGGAAAAAACTAG
CTAGGATAGGTGTACTTGGG

Downstream 100 bases:

>100_bases
TTAAGGACTATGTATATCCTTGCCCCTTGATCGCTGTTCTCCAGCTTGAATGATACTATCCCCCAGTACCCCTTTAAATC
AACTCTGTTTCTTCCCTCCT

Product: serine protease

Products: NA

Alternate protein names: Serine Protease; Nodulation Protein; Protease/Transporter; Short-Chain Alcohol Dehydrogenase; Membrane-Bound Serine Protease; Nodulation Protein Nfed

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MVRNPLLFFALVIVVALLIQVISISGDNSQAYTRTINQAIVLDITPPFDTIDTGIAECFMDALREAESTGSLLIYRVNSY
GGLLDAGFTIGDAVLYSKTPTVAYVETKALSAATLIILPANIIALQRYSTIGDMQPVMVDPLTGQIQFINEPKILNPIIE
KAKTYASRSNRNQTIIEEFVTHALTINSSLAIASRVADLEVENFDELLTTLNGAHVRIGDTEYVLNIDRGMMKTFSCSIR
SRIISILSNSYIANILTTIGMLATIFALVSGKLAILPLTIGMLLLGLVGTGFSANMVSAFLIILGALLLALELFVIPGFG
VVGVSGIILLTLGFALLPVYVPTGVSPSGEYIAVLRLYILVISLFLGGVFGIVIYKVAKVRRKKPVEFLPVSKKGRAIDE
LKPGSIGFVVVEGEYWRAVSNEYIAPGEEVIVEEMLENGVLRVRKKTDNH

Sequences:

>Translated_450_residues
MVRNPLLFFALVIVVALLIQVISISGDNSQAYTRTINQAIVLDITPPFDTIDTGIAECFMDALREAESTGSLLIYRVNSY
GGLLDAGFTIGDAVLYSKTPTVAYVETKALSAATLIILPANIIALQRYSTIGDMQPVMVDPLTGQIQFINEPKILNPIIE
KAKTYASRSNRNQTIIEEFVTHALTINSSLAIASRVADLEVENFDELLTTLNGAHVRIGDTEYVLNIDRGMMKTFSCSIR
SRIISILSNSYIANILTTIGMLATIFALVSGKLAILPLTIGMLLLGLVGTGFSANMVSAFLIILGALLLALELFVIPGFG
VVGVSGIILLTLGFALLPVYVPTGVSPSGEYIAVLRLYILVISLFLGGVFGIVIYKVAKVRRKKPVEFLPVSKKGRAIDE
LKPGSIGFVVVEGEYWRAVSNEYIAPGEEVIVEEMLENGVLRVRKKTDNH
>Mature_450_residues
MVRNPLLFFALVIVVALLIQVISISGDNSQAYTRTINQAIVLDITPPFDTIDTGIAECFMDALREAESTGSLLIYRVNSY
GGLLDAGFTIGDAVLYSKTPTVAYVETKALSAATLIILPANIIALQRYSTIGDMQPVMVDPLTGQIQFINEPKILNPIIE
KAKTYASRSNRNQTIIEEFVTHALTINSSLAIASRVADLEVENFDELLTTLNGAHVRIGDTEYVLNIDRGMMKTFSCSIR
SRIISILSNSYIANILTTIGMLATIFALVSGKLAILPLTIGMLLLGLVGTGFSANMVSAFLIILGALLLALELFVIPGFG
VVGVSGIILLTLGFALLPVYVPTGVSPSGEYIAVLRLYILVISLFLGGVFGIVIYKVAKVRRKKPVEFLPVSKKGRAIDE
LKPGSIGFVVVEGEYWRAVSNEYIAPGEEVIVEEMLENGVLRVRKKTDNH

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48747; Mature: 48747

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNPLLFFALVIVVALLIQVISISGDNSQAYTRTINQAIVLDITPPFDTIDTGIAECFM
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
DALREAESTGSLLIYRVNSYGGLLDAGFTIGDAVLYSKTPTVAYVETKALSAATLIILPA
HHHHHCCCCCCEEEEEECCCCCCEECCCCCCCEEEECCCCCEEEEEEHHCCCEEEEEECC
NIIALQRYSTIGDMQPVMVDPLTGQIQFINEPKILNPIIEKAKTYASRSNRNQTIIEEFV
HHHHHHHHHHCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
THALTINSSLAIASRVADLEVENFDELLTTLNGAHVRIGDTEYVLNIDRGMMKTFSCSIR
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHH
SRIISILSNSYIANILTTIGMLATIFALVSGKLAILPLTIGMLLLGLVGTGFSANMVSAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIILGALLLALELFVIPGFGVVGVSGIILLTLGFALLPVYVPTGVSPSGEYIAVLRLYIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VISLFLGGVFGIVIYKVAKVRRKKPVEFLPVSKKGRAIDELKPGSIGFVVVEGEYWRAVS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHCCCCCCEEEEEECCHHHHHHC
NEYIAPGEEVIVEEMLENGVLRVRKKTDNH
CCCCCCCHHHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MVRNPLLFFALVIVVALLIQVISISGDNSQAYTRTINQAIVLDITPPFDTIDTGIAECFM
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
DALREAESTGSLLIYRVNSYGGLLDAGFTIGDAVLYSKTPTVAYVETKALSAATLIILPA
HHHHHCCCCCCEEEEEECCCCCCEECCCCCCCEEEECCCCCEEEEEEHHCCCEEEEEECC
NIIALQRYSTIGDMQPVMVDPLTGQIQFINEPKILNPIIEKAKTYASRSNRNQTIIEEFV
HHHHHHHHHHCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
THALTINSSLAIASRVADLEVENFDELLTTLNGAHVRIGDTEYVLNIDRGMMKTFSCSIR
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHH
SRIISILSNSYIANILTTIGMLATIFALVSGKLAILPLTIGMLLLGLVGTGFSANMVSAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIILGALLLALELFVIPGFGVVGVSGIILLTLGFALLPVYVPTGVSPSGEYIAVLRLYIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VISLFLGGVFGIVIYKVAKVRRKKPVEFLPVSKKGRAIDELKPGSIGFVVVEGEYWRAVS
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHCCCCCCEEEEEECCHHHHHHC
NEYIAPGEEVIVEEMLENGVLRVRKKTDNH
CCCCCCCHHHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA