| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883756
Identifier: 218883756
GI number: 218883756
Start: 412960
End: 414192
Strand: Reverse
Name: 218883756
Synonym: DKAM_0445
Alternate gene names: NA
Gene position: 414192-412960 (Counterclockwise)
Preceding gene: 218883757
Following gene: 218883755
Centisome position: 30.34
GC content: 50.69
Gene sequence:
>1233_bases TTGAAGATTACAAGTACAGGTATAGTGTACCTCGTGCTCACTACGCTCTCTCTCATATACTCCATTGCATCCACGAACCC CTTCTACTACTTGTTATCACTGCTAGCTGTCTCCATCTTCATTAGTGAATACTACTTGTTCAGGGATGTCTCATCGGTGA TCAATGAGGTAAAGGTCTCCAGGAGAATCCCCGGTAGAAGCATCCTGGAGCTTGAGACCGTTGAGATCGGCGTGGAGTTG AGTAATGACACCGGTAGAAGCATACCAAGGGTACTCGTCATAGAGGATTTCCCGAGGTATATCCAGCCAGAGGTGAAACC CGTCTTCACGGTTTTCCTCCCAGCCTACTCGAAGAGTATTCTGAGCTATCGTGTCAAAGCCCTTGCCCCAGGCAGGATCG ACCTTCCTGGTCTCCGCCTGGTTTTCACTGATCCGCTTTCATTCTTCTATGATACCTTATCAATCGAGCTACGCAATTAT ATTGTTGCTCAACCCCTCTACACAAGGATCGATGAAGCCCTGAAGAGTATTGAGAGAATTACAGGCATCAATACGAGGGG CCATGCCTTCGGTGGAGAATATGATCTAGCTAATATAAGAGAGTACTTTCCCGGCGACGATGTTAGGAGGATACTCTGGA AACATTATGCTAAGACTGGGAACCTAATGGTGAGAGAGGACTATGGCGATGTAAGGCCCTCCATCCTTCTAGTGATTGAC ATCCGTAAAAGGCTCTGGGAGATAGGCTCAGGCGTGAACACCCTGGCCCACGTGCAGCTGAGGCTCGCTCGATCTCTGTT GGAGAGCCTCTCAACAGTGATGGCCCACGTGGATGTGGCAATGTGCACGGAGCAGTCGCCGAAGATATACTTCGATGCCT GGAGAGACCCCAGTGAGGCATTCTATTCCCTCATCAGCACCCTGCAACCAGGCGGGGGCTGCGAGGTCCCCCTGTCAACT ATTAAGCAGGTGCTTGCCTACACTAGTGGCAGGAGATATGATTCGGTTATCATTGTCACTAATCCTGTAACACTGGTTGA GGACGGCGTTGACCCAGTGAAGGAGATGGCATCCCTGGCACCCGGTAGGACGATAGTGGTCTTACCCAGGTTCGACTACG ATGTATACGCTGGATTAAGGGGAAAAGAACTCGCCGCGGTCGTGGGGGAGCTGGTGGGTGAGACGGGTGTTGAGGCATTT ATCGTCGAGGAGGATTTAAGGGTGGTTGTATAG
Upstream 100 bases:
>100_bases CTGCCTTATCTCATAGGCTGATATTGAGGAGTGAGGCGAGGTTGTCGAAGCTCACGCCTGAGTCGATCATAGATGATATC CTCGAGAAGGTGGAGCCTCC
Downstream 100 bases:
>100_bases TGATCTACTTATTTATCACGCTGATACTGCTCCCGCCTTTTGTGCTATTAGACCTACTGCTAGGCATCGGTGCAACCCCA CTTATGCTTCTAGTTGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKITSTGIVYLVLTTLSLIYSIASTNPFYYLLSLLAVSIFISEYYLFRDVSSVINEVKVSRRIPGRSILELETVEIGVEL SNDTGRSIPRVLVIEDFPRYIQPEVKPVFTVFLPAYSKSILSYRVKALAPGRIDLPGLRLVFTDPLSFFYDTLSIELRNY IVAQPLYTRIDEALKSIERITGINTRGHAFGGEYDLANIREYFPGDDVRRILWKHYAKTGNLMVREDYGDVRPSILLVID IRKRLWEIGSGVNTLAHVQLRLARSLLESLSTVMAHVDVAMCTEQSPKIYFDAWRDPSEAFYSLISTLQPGGGCEVPLST IKQVLAYTSGRRYDSVIIVTNPVTLVEDGVDPVKEMASLAPGRTIVVLPRFDYDVYAGLRGKELAAVVGELVGETGVEAF IVEEDLRVVV
Sequences:
>Translated_410_residues MKITSTGIVYLVLTTLSLIYSIASTNPFYYLLSLLAVSIFISEYYLFRDVSSVINEVKVSRRIPGRSILELETVEIGVEL SNDTGRSIPRVLVIEDFPRYIQPEVKPVFTVFLPAYSKSILSYRVKALAPGRIDLPGLRLVFTDPLSFFYDTLSIELRNY IVAQPLYTRIDEALKSIERITGINTRGHAFGGEYDLANIREYFPGDDVRRILWKHYAKTGNLMVREDYGDVRPSILLVID IRKRLWEIGSGVNTLAHVQLRLARSLLESLSTVMAHVDVAMCTEQSPKIYFDAWRDPSEAFYSLISTLQPGGGCEVPLST IKQVLAYTSGRRYDSVIIVTNPVTLVEDGVDPVKEMASLAPGRTIVVLPRFDYDVYAGLRGKELAAVVGELVGETGVEAF IVEEDLRVVV >Mature_410_residues MKITSTGIVYLVLTTLSLIYSIASTNPFYYLLSLLAVSIFISEYYLFRDVSSVINEVKVSRRIPGRSILELETVEIGVEL SNDTGRSIPRVLVIEDFPRYIQPEVKPVFTVFLPAYSKSILSYRVKALAPGRIDLPGLRLVFTDPLSFFYDTLSIELRNY IVAQPLYTRIDEALKSIERITGINTRGHAFGGEYDLANIREYFPGDDVRRILWKHYAKTGNLMVREDYGDVRPSILLVID IRKRLWEIGSGVNTLAHVQLRLARSLLESLSTVMAHVDVAMCTEQSPKIYFDAWRDPSEAFYSLISTLQPGGGCEVPLST IKQVLAYTSGRRYDSVIIVTNPVTLVEDGVDPVKEMASLAPGRTIVVLPRFDYDVYAGLRGKELAAVVGELVGETGVEAF IVEEDLRVVV
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45949; Mature: 45949
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITSTGIVYLVLTTLSLIYSIASTNPFYYLLSLLAVSIFISEYYLFRDVSSVINEVKVS CEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRIPGRSILELETVEIGVELSNDTGRSIPRVLVIEDFPRYIQPEVKPVFTVFLPAYSKSI HCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHH LSYRVKALAPGRIDLPGLRLVFTDPLSFFYDTLSIELRNYIVAQPLYTRIDEALKSIERI HHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TGINTRGHAFGGEYDLANIREYFPGDDVRRILWKHYAKTGNLMVREDYGDVRPSILLVID HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEH IRKRLWEIGSGVNTLAHVQLRLARSLLESLSTVMAHVDVAMCTEQSPKIYFDAWRDPSEA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH FYSLISTLQPGGGCEVPLSTIKQVLAYTSGRRYDSVIIVTNPVTLVEDGVDPVKEMASLA HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHEECCCCHHHHHHHHCC PGRTIVVLPRFDYDVYAGLRGKELAAVVGELVGETGVEAFIVEEDLRVVV CCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEC >Mature Secondary Structure MKITSTGIVYLVLTTLSLIYSIASTNPFYYLLSLLAVSIFISEYYLFRDVSSVINEVKVS CEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRIPGRSILELETVEIGVELSNDTGRSIPRVLVIEDFPRYIQPEVKPVFTVFLPAYSKSI HCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHH LSYRVKALAPGRIDLPGLRLVFTDPLSFFYDTLSIELRNYIVAQPLYTRIDEALKSIERI HHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TGINTRGHAFGGEYDLANIREYFPGDDVRRILWKHYAKTGNLMVREDYGDVRPSILLVID HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEH IRKRLWEIGSGVNTLAHVQLRLARSLLESLSTVMAHVDVAMCTEQSPKIYFDAWRDPSEA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH FYSLISTLQPGGGCEVPLSTIKQVLAYTSGRRYDSVIIVTNPVTLVEDGVDPVKEMASLA HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHEECCCCHHHHHHHHCC PGRTIVVLPRFDYDVYAGLRGKELAAVVGELVGETGVEAFIVEEDLRVVV CCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA