Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883755

Identifier: 218883755

GI number: 218883755

Start: 412319

End: 412960

Strand: Reverse

Name: 218883755

Synonym: DKAM_0444

Alternate gene names: NA

Gene position: 412960-412319 (Counterclockwise)

Preceding gene: 218883756

Following gene: 218883754

Centisome position: 30.25

GC content: 45.64

Gene sequence:

>642_bases
GTGATCTACTTATTTATCACGCTGATACTGCTCCCGCCTTTTGTGCTATTAGACCTACTGCTAGGCATCGGTGCAACCCC
ACTTATGCTTCTAGTTGTCTCAATTCTCTCAACTATCGTCCAACCTGATCCCTCATTGATCCTCTCACCACTCCTACTCG
TGGTCGCTGGCTTCCTTGAGTACGTGTATAGGATCAGGGGGCCCAATATAGGGATTGGAGTGATGTTCCTCGAGACTTAC
TCCACCCAGTTTTTCTTCCTGGTCTTCGGTGCATTGATAGCGTTGCTGCTCAACACTAATAGCTTGCCGGGTCTTGATGC
ATGGTCTTCGTCATTTATTTATTTAACAATATACTTCACTACTTCACTGCTCCTGGTACGGGGAGGGGAAGATGCTTTAG
CGTGGATTGAGGGGTTATTGGAGCACAGTGTTGAAGGAGTTGAGGATGCATTATGGTATGTATCTCTGGTTCTAGCATTC
GTCCTCTCGATCAATGTCTACATGGAGATACACGTGTATGCACTGGTTTACCTTGCTCTACTGGGGTTAGCGGTCTATTA
TAGAGGGAGATTAATCCCCGGTAGACTCATGCTTCTGGCTTCACTACTGTACGCTTTAATACTTACACTATTTTTAAGGT
AA

Upstream 100 bases:

>100_bases
GATTAAGGGGAAAAGAACTCGCCGCGGTCGTGGGGGAGCTGGTGGGTGAGACGGGTGTTGAGGCATTTATCGTCGAGGAG
GATTTAAGGGTGGTTGTATA

Downstream 100 bases:

>100_bases
TGTAGCGGGTGAGGGATAGTGGATTACTTGGCATCTAATATTGTTAAAGCAGCATTCGTGATCCTACTTATTGCATCAAT
AGTCTTCCTAGCTGTATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIYLFITLILLPPFVLLDLLLGIGATPLMLLVVSILSTIVQPDPSLILSPLLLVVAGFLEYVYRIRGPNIGIGVMFLETY
STQFFFLVFGALIALLLNTNSLPGLDAWSSSFIYLTIYFTTSLLLVRGGEDALAWIEGLLEHSVEGVEDALWYVSLVLAF
VLSINVYMEIHVYALVYLALLGLAVYYRGRLIPGRLMLLASLLYALILTLFLR

Sequences:

>Translated_213_residues
MIYLFITLILLPPFVLLDLLLGIGATPLMLLVVSILSTIVQPDPSLILSPLLLVVAGFLEYVYRIRGPNIGIGVMFLETY
STQFFFLVFGALIALLLNTNSLPGLDAWSSSFIYLTIYFTTSLLLVRGGEDALAWIEGLLEHSVEGVEDALWYVSLVLAF
VLSINVYMEIHVYALVYLALLGLAVYYRGRLIPGRLMLLASLLYALILTLFLR
>Mature_213_residues
MIYLFITLILLPPFVLLDLLLGIGATPLMLLVVSILSTIVQPDPSLILSPLLLVVAGFLEYVYRIRGPNIGIGVMFLETY
STQFFFLVFGALIALLLNTNSLPGLDAWSSSFIYLTIYFTTSLLLVRGGEDALAWIEGLLEHSVEGVEDALWYVSLVLAF
VLSINVYMEIHVYALVYLALLGLAVYYRGRLIPGRLMLLASLLYALILTLFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23682; Mature: 23682

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLFITLILLPPFVLLDLLLGIGATPLMLLVVSILSTIVQPDPSLILSPLLLVVAGFLE
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YVYRIRGPNIGIGVMFLETYSTQFFFLVFGALIALLLNTNSLPGLDAWSSSFIYLTIYFT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHH
TSLLLVRGGEDALAWIEGLLEHSVEGVEDALWYVSLVLAFVLSINVYMEIHVYALVYLAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLAVYYRGRLIPGRLMLLASLLYALILTLFLR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYLFITLILLPPFVLLDLLLGIGATPLMLLVVSILSTIVQPDPSLILSPLLLVVAGFLE
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YVYRIRGPNIGIGVMFLETYSTQFFFLVFGALIALLLNTNSLPGLDAWSSSFIYLTIYFT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHH
TSLLLVRGGEDALAWIEGLLEHSVEGVEDALWYVSLVLAFVLSINVYMEIHVYALVYLAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLAVYYRGRLIPGRLMLLASLLYALILTLFLR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA