| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is mptA [H]
Identifier: 218883738
GI number: 218883738
Start: 398459
End: 399331
Strand: Reverse
Name: mptA [H]
Synonym: DKAM_0427
Alternate gene names: 218883738
Gene position: 399331-398459 (Counterclockwise)
Preceding gene: 218883739
Following gene: 218883737
Centisome position: 29.25
GC content: 46.85
Gene sequence:
>873_bases GTGGAAGTGGTTGATGTGGCCCACGATGGGATCCCCGATGTCCACAGTGAGAAACCCCCATTCGAGTTGGATGTGGATAA TGTTGGCTTAAGAGGGCTTCGTGGACCCATTATGAAGATTAGGGAATACATGGTTATCCCGGTATTCAAGGTGTCGGTTA GCTTACCGGCATCATTTAGGGGGGCTCATTTATCGCGTTTATACAGGGCTTATACAGGGGTTGTGAAACCAGGTGCCGAG CTAACAATGGATTTACTGAGGCAGCTAGCCATAAGGCTACTCGAGGTAAACGAGTATGCTGTGAGAGCCATGGTTTCAGT TAAGGGGAGGCTCTATCATACGGTGGATCGGGGAGGTGTACCGGAGTACTCTAGCAACGGTTTTATATACGCTGGCGTGA GGTATGAGCGTGGAGGCAGCGTGAGTGAATACACTGGTGGAGGCATTTACGGGTTAACCACCTGTCCATGTGCAGGAGCG GTCTCTAGACATATATATGGGGAACCCTACACCCACATGCAGAAGGTAAGGATTAATGCATATATTAAGTCCAGTAAAAC CCTTATCGAGCCCATAGAGGTCTTCGAGAAGCTTAATACAGTTGTCTACACACCACGTAACTACCTTAAGAGGATTGAGG AGGCCGAATTCGTTAAGATGATATATGAGAAGCCGCTGTTCACAGAGGATATCGCCAGGCTTGCAGCAGTTAAGCTAGCC GAGCTAGTGGCTAACCATGGAATCAGCGGGCCCGATGGAATATTATATGTGAGTGTAAGATCCTATGAAACCATACACGA GTACATTGTTGAATCAATAGTTAGAACCAGGTTAACCGATATCGCTGGCTTTAAGATAATTAATAAGACTTAA
Upstream 100 bases:
>100_bases GGGGTTAAAGCATCCAAGAGACTTGAGGGTTCTAAGAGAATAGATGAACTAGTTAATGAGGTATCAAACTTCATCAAGAG TGTTAAGGGTAGTCAAGTAA
Downstream 100 bases:
>100_bases ATAGGGTGGTTAATTGAGCTGGGTAATAGATCCCTCTGAGTGGAAACCGTTGTATAATTACATAAAGTCCAGGCTGAACC TTTCATTTGATAGGGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MEVVDVAHDGIPDVHSEKPPFELDVDNVGLRGLRGPIMKIREYMVIPVFKVSVSLPASFRGAHLSRLYRAYTGVVKPGAE LTMDLLRQLAIRLLEVNEYAVRAMVSVKGRLYHTVDRGGVPEYSSNGFIYAGVRYERGGSVSEYTGGGIYGLTTCPCAGA VSRHIYGEPYTHMQKVRINAYIKSSKTLIEPIEVFEKLNTVVYTPRNYLKRIEEAEFVKMIYEKPLFTEDIARLAAVKLA ELVANHGISGPDGILYVSVRSYETIHEYIVESIVRTRLTDIAGFKIINKT
Sequences:
>Translated_290_residues MEVVDVAHDGIPDVHSEKPPFELDVDNVGLRGLRGPIMKIREYMVIPVFKVSVSLPASFRGAHLSRLYRAYTGVVKPGAE LTMDLLRQLAIRLLEVNEYAVRAMVSVKGRLYHTVDRGGVPEYSSNGFIYAGVRYERGGSVSEYTGGGIYGLTTCPCAGA VSRHIYGEPYTHMQKVRINAYIKSSKTLIEPIEVFEKLNTVVYTPRNYLKRIEEAEFVKMIYEKPLFTEDIARLAAVKLA ELVANHGISGPDGILYVSVRSYETIHEYIVESIVRTRLTDIAGFKIINKT >Mature_290_residues MEVVDVAHDGIPDVHSEKPPFELDVDNVGLRGLRGPIMKIREYMVIPVFKVSVSLPASFRGAHLSRLYRAYTGVVKPGAE LTMDLLRQLAIRLLEVNEYAVRAMVSVKGRLYHTVDRGGVPEYSSNGFIYAGVRYERGGSVSEYTGGGIYGLTTCPCAGA VSRHIYGEPYTHMQKVRINAYIKSSKTLIEPIEVFEKLNTVVYTPRNYLKRIEEAEFVKMIYEKPLFTEDIARLAAVKLA ELVANHGISGPDGILYVSVRSYETIHEYIVESIVRTRLTDIAGFKIINKT
Specific function: Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin [H]
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003801 - InterPro: IPR022840 - InterPro: IPR002042 [H]
Pfam domain/function: PF02649 DUF198 [H]
EC number: NA
Molecular weight: Translated: 32464; Mature: 32464
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVDVAHDGIPDVHSEKPPFELDVDNVGLRGLRGPIMKIREYMVIPVFKVSVSLPASFR CCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCCC GAHLSRLYRAYTGVVKPGAELTMDLLRQLAIRLLEVNEYAVRAMVSVKGRLYHTVDRGGV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC PEYSSNGFIYAGVRYERGGSVSEYTGGGIYGLTTCPCAGAVSRHIYGEPYTHMQKVRINA CCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHEEEEE YIKSSKTLIEPIEVFEKLNTVVYTPRNYLKRIEEAEFVKMIYEKPLFTEDIARLAAVKLA EEECCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ELVANHGISGPDGILYVSVRSYETIHEYIVESIVRTRLTDIAGFKIINKT HHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEECCC >Mature Secondary Structure MEVVDVAHDGIPDVHSEKPPFELDVDNVGLRGLRGPIMKIREYMVIPVFKVSVSLPASFR CCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCCC GAHLSRLYRAYTGVVKPGAELTMDLLRQLAIRLLEVNEYAVRAMVSVKGRLYHTVDRGGV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC PEYSSNGFIYAGVRYERGGSVSEYTGGGIYGLTTCPCAGAVSRHIYGEPYTHMQKVRINA CCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHEEEEE YIKSSKTLIEPIEVFEKLNTVVYTPRNYLKRIEEAEFVKMIYEKPLFTEDIARLAAVKLA EEECCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ELVANHGISGPDGILYVSVRSYETIHEYIVESIVRTRLTDIAGFKIINKT HHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11121031 [H]