| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is bglA [H]
Identifier: 218883564
GI number: 218883564
Start: 233729
End: 234922
Strand: Direct
Name: bglA [H]
Synonym: DKAM_0253
Alternate gene names: 218883564
Gene position: 233729-234922 (Clockwise)
Preceding gene: 218883562
Following gene: 218883571
Centisome position: 17.12
GC content: 47.49
Gene sequence:
>1194_bases ATGTATAATGACTGGTGGTATTGGGAGACAACTGGAAGGCTAAGAGTTAAATCAGGAAAGGCATGCAATCACTGGGAACT CTACCGTGAAGACATAGAGTTGATGAGTAGGCTCGGCTACGATGGATACAGGTTCTCCATAGAGTGGAGCAGGATATTCC CCCAGGAGAACTTGTTCGATGAGAGGGCTTTAAACAGGTACGTGGAGATCGTGGAGCTCCTAAGAAAGCACGGGATAACC CCAGTGGTCACACTACACCATTTCACGAGCCCCAAATGGTTTATTGATAAAGGGGGATGGCTTAGAGAGGAGAACATATC CTACTTCAGGAGGTATGTTGAAGCAGTTGTGGATAGTGTTAAAGGGGTGAACTACTGGGTTGTCTTCAACGAGCCAAATG TTTACATTCTCCAGGGCTACATAATGGGCGCGTGGCCCCCTGGCTACAAAAGTCTGAAGATAGCTGATAAGGCAGCAGTG AACATCGTGAAGGCTTATAAGGAGGCCTACGAGGTCCTCAAAGGAAGGGGGAAAGTAGGGGTAGCCCAGAACCTGATATC CTTCAAGCCGGCTAGTGATGGTAGACGGGATCTCAATGCATGCGAGAAAGCTAGGGAGGCATATAACCACGGGTTCCTGA AAGGGGTACTCCAGGGAGAATATGTTTCACTGAGAGGGATAAAGAGGATTGAGGAGAGCGATATGGACTTCATCGGCGTC AACTATTATAGTGGGTTCGTGGTTAAACACGTGTTCAACCCCTTGAAGATGTTCATGGATGTGAGGCCTCTTGACACAGG GTTGTGGACCACTATGGGGTACTGTATATACCCCAGGGGGATCTATGAGGTGACGAGAGAAGTCTATGATAGATACAGGA GGGATATCATTATCACGGAGAACGGTGTAGCCGTTAAAGATGATGAGTTAAGGATACTCTCGATTGTGAGGCACCTCCAA TATGTCTACAAGGCTTTATCCGAGGGTATACCTATACACGGCTACTATTACTGGAGCTTCATGGATAACTATGAATGGGA TAAGGGCTTCGAGCAGAGGTTCGGCTTGTTCGAGGTAGACTACTCGACGTTCGAGAGGAAGCCGAGGAGAAGCGCGTATG TCTATAGCGAGATAGCAAGAACTAAGAGGATAAGCGATGAGCTACTGGAGAAGTATGGTGAAAAACAGAGTTAA
Upstream 100 bases:
>100_bases TAGATATTCTAGATAATAAGAGGAGATACCCTTGATAGAATTTCCCCGGGATTTCACGTTTGGAACAGCAACGGCTTCCC ACCAGATTGAAGGAGACAAC
Downstream 100 bases:
>100_bases CCAAGACTACTTCTTCCCAGCTAGAAATTCCTTCGCTACATTATATGCTTTCAAGGCATACATGAGGGCGGGCCCGCCGC CCATGCATACAGCTACCTTT
Product: glycoside hydrolase, family 1
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MYNDWWYWETTGRLRVKSGKACNHWELYREDIELMSRLGYDGYRFSIEWSRIFPQENLFDERALNRYVEIVELLRKHGIT PVVTLHHFTSPKWFIDKGGWLREENISYFRRYVEAVVDSVKGVNYWVVFNEPNVYILQGYIMGAWPPGYKSLKIADKAAV NIVKAYKEAYEVLKGRGKVGVAQNLISFKPASDGRRDLNACEKAREAYNHGFLKGVLQGEYVSLRGIKRIEESDMDFIGV NYYSGFVVKHVFNPLKMFMDVRPLDTGLWTTMGYCIYPRGIYEVTREVYDRYRRDIIITENGVAVKDDELRILSIVRHLQ YVYKALSEGIPIHGYYYWSFMDNYEWDKGFEQRFGLFEVDYSTFERKPRRSAYVYSEIARTKRISDELLEKYGEKQS
Sequences:
>Translated_397_residues MYNDWWYWETTGRLRVKSGKACNHWELYREDIELMSRLGYDGYRFSIEWSRIFPQENLFDERALNRYVEIVELLRKHGIT PVVTLHHFTSPKWFIDKGGWLREENISYFRRYVEAVVDSVKGVNYWVVFNEPNVYILQGYIMGAWPPGYKSLKIADKAAV NIVKAYKEAYEVLKGRGKVGVAQNLISFKPASDGRRDLNACEKAREAYNHGFLKGVLQGEYVSLRGIKRIEESDMDFIGV NYYSGFVVKHVFNPLKMFMDVRPLDTGLWTTMGYCIYPRGIYEVTREVYDRYRRDIIITENGVAVKDDELRILSIVRHLQ YVYKALSEGIPIHGYYYWSFMDNYEWDKGFEQRFGLFEVDYSTFERKPRRSAYVYSEIARTKRISDELLEKYGEKQS >Mature_397_residues MYNDWWYWETTGRLRVKSGKACNHWELYREDIELMSRLGYDGYRFSIEWSRIFPQENLFDERALNRYVEIVELLRKHGIT PVVTLHHFTSPKWFIDKGGWLREENISYFRRYVEAVVDSVKGVNYWVVFNEPNVYILQGYIMGAWPPGYKSLKIADKAAV NIVKAYKEAYEVLKGRGKVGVAQNLISFKPASDGRRDLNACEKAREAYNHGFLKGVLQGEYVSLRGIKRIEESDMDFIGV NYYSGFVVKHVFNPLKMFMDVRPLDTGLWTTMGYCIYPRGIYEVTREVYDRYRRDIIITENGVAVKDDELRILSIVRHLQ YVYKALSEGIPIHGYYYWSFMDNYEWDKGFEQRFGLFEVDYSTFERKPRRSAYVYSEIARTKRISDELLEKYGEKQS
Specific function: Can Hydrolyze Salicin, Cellobiose, And Probably Arbutin. [C]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI13273313, Length=418, Percent_Identity=28.4688995215311, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI32481206, Length=425, Percent_Identity=27.7647058823529, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI110681710, Length=416, Percent_Identity=26.6826923076923, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI24497614, Length=377, Percent_Identity=26.525198938992, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI28376633, Length=395, Percent_Identity=24.3037974683544, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1789070, Length=418, Percent_Identity=28.2296650717703, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI2367174, Length=387, Percent_Identity=27.6485788113695, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI2367270, Length=409, Percent_Identity=25.9168704156479, Blast_Score=104, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17552856, Length=414, Percent_Identity=30.1932367149758, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17539390, Length=437, Percent_Identity=28.8329519450801, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI21356577, Length=440, Percent_Identity=27.5, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 47054; Mature: 47054
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNDWWYWETTGRLRVKSGKACNHWELYREDIELMSRLGYDGYRFSIEWSRIFPQENLFD CCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHH ERALNRYVEIVELLRKHGITPVVTLHHFTSPKWFIDKGGWLREENISYFRRYVEAVVDSV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH KGVNYWVVFNEPNVYILQGYIMGAWPPGYKSLKIADKAAVNIVKAYKEAYEVLKGRGKVG CCCEEEEEECCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC VAQNLISFKPASDGRRDLNACEKAREAYNHGFLKGVLQGEYVSLRGIKRIEESDMDFIGV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEE NYYSGFVVKHVFNPLKMFMDVRPLDTGLWTTMGYCIYPRGIYEVTREVYDRYRRDIIITE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHCCEEEEC NGVAVKDDELRILSIVRHLQYVYKALSEGIPIHGYYYWSFMDNYEWDKGFEQRFGLFEVD CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEC YSTFERKPRRSAYVYSEIARTKRISDELLEKYGEKQS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYNDWWYWETTGRLRVKSGKACNHWELYREDIELMSRLGYDGYRFSIEWSRIFPQENLFD CCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHH ERALNRYVEIVELLRKHGITPVVTLHHFTSPKWFIDKGGWLREENISYFRRYVEAVVDSV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH KGVNYWVVFNEPNVYILQGYIMGAWPPGYKSLKIADKAAVNIVKAYKEAYEVLKGRGKVG CCCEEEEEECCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC VAQNLISFKPASDGRRDLNACEKAREAYNHGFLKGVLQGEYVSLRGIKRIEESDMDFIGV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEE NYYSGFVVKHVFNPLKMFMDVRPLDTGLWTTMGYCIYPRGIYEVTREVYDRYRRDIIITE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHCCEEEEC NGVAVKDDELRILSIVRHLQYVYKALSEGIPIHGYYYWSFMDNYEWDKGFEQRFGLFEVD CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEC YSTFERKPRRSAYVYSEIARTKRISDELLEKYGEKQS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]