| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is creN7 [H]
Identifier: 218883495
GI number: 218883495
Start: 170109
End: 170306
Strand: Direct
Name: creN7 [H]
Synonym: DKAM_0182
Alternate gene names: 218883495
Gene position: 170109-170306 (Clockwise)
Preceding gene: 218883494
Following gene: 218883496
Centisome position: 12.46
GC content: 50.0
Gene sequence:
>198_bases ATGGTGATCCATATGCCCTGTACAGAGAAAGTAAAGGTGAAAACCCCAGGCGGTAGGGAACTAGAGCTAGTTCCTGTAAA GGTATGGCAGCTGAACCCAAGGGGTAGGAAAGGAGTTAAGATAGGGTTGTTCCAGGATCCTGGAACCGGGAGATACTTTA GAACCAGGGTACCAGAGGAATACCCGCTCTGCAGCTAG
Upstream 100 bases:
>100_bases ATAACATTGTTATGTACATAGATAGTGTTGTATCGAGAAAAATCGAATAATTACTAAGCTATGGGAAAAATTATATAAGG GTTTAACATATTAATTTACA
Downstream 100 bases:
>100_bases CCGGTTACTATAGCATATTTTTAACCCTCTATCTCTGTTTTGAGGATATGATCCTCTTCCAAGATAGTACCCATCCAGAC CTCTATTAATCCTGGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MVIHMPCTEKVKVKTPGGRELELVPVKVWQLNPRGRKGVKIGLFQDPGTGRYFRTRVPEEYPLCS
Sequences:
>Translated_65_residues MVIHMPCTEKVKVKTPGGRELELVPVKVWQLNPRGRKGVKIGLFQDPGTGRYFRTRVPEEYPLCS >Mature_65_residues MVIHMPCTEKVKVKTPGGRELELVPVKVWQLNPRGRKGVKIGLFQDPGTGRYFRTRVPEEYPLCS
Specific function: A probable chromatin protein, binds double-strand DNA without sequence specificity. Constrains negative DNA supercoils [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cren7 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020906 [H]
Pfam domain/function: PF11520 Cren7 [H]
EC number: NA
Molecular weight: Translated: 7424; Mature: 7424
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIHMPCTEKVKVKTPGGRELELVPVKVWQLNPRGRKGVKIGLFQDPGTGRYFRTRVPEE CEEECCCCCCEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCC YPLCS CCCCC >Mature Secondary Structure MVIHMPCTEKVKVKTPGGRELELVPVKVWQLNPRGRKGVKIGLFQDPGTGRYFRTRVPEE CEEECCCCCCEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCC YPLCS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA