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The map label for this gene is 218883403

Identifier: 218883403

GI number: 218883403

Start: 79735

End: 80121

Strand: Reverse

Name: 218883403

Synonym: DKAM_0089

Alternate gene names: NA

Gene position: 80121-79735 (Counterclockwise)

Preceding gene: 218883404

Following gene: 218883402

Centisome position: 5.87

GC content: 51.16

Gene sequence:

>387_bases
TTGACACCGGAGGAGATTGAAGGCATTTTCAGGGCGCTACCACTTGAAGTAACGTACGGTGACATAAACGACAGAGTCAG
GTTCTTCTCAGAGAGCGAGATAACCGGCGGCTTCGTGAGGACGAAGACCATACTGGGAAGGAGAATACCGTTCTGCCACC
CACCGAGGCTCGAGAAGTACGTTATGACGAACGTCGAGGCCTTGAAGAAGGGGCAGTTCAAGTACAGAGAGTTCTGGACG
AGGCTGGGAGACAGGGTAATAAGAGTCATAATCGCGCCTGTCAAGAACAGGGAAGGAAAGTTACTCGGGACATTAGAAAT
AGTTGAAGACCTGACGGACGTCGTGAACAACCCCGAGGAGGTCAAGAAGAAGATCCTGGTGCTATAG

Upstream 100 bases:

>100_bases
TCTAGGGTAGCATAACGGTCACTATGAACTCGTCATAGCGAAATACCCAGACACTTACATCGTTAAGAGGGAGGGGGACC
TCGAGCTCGAAACAGGCTTC

Downstream 100 bases:

>100_bases
AATGAAGAGCATACTAGAGTTCGCCGCCAGGCACGTAGAGCCCTCGCTAAAGAGGAGCCTCGCAATCAAGCTCCTGGCCA
GAGGAGTCGACCGGGGCAAG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Sensory Box Protein; Pas/Pac Sensor Protein; PAS Domain S-Box Protein

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTPEEIEGIFRALPLEVTYGDINDRVRFFSESEITGGFVRTKTILGRRIPFCHPPRLEKYVMTNVEALKKGQFKYREFWT
RLGDRVIRVIIAPVKNREGKLLGTLEIVEDLTDVVNNPEEVKKKILVL

Sequences:

>Translated_128_residues
MTPEEIEGIFRALPLEVTYGDINDRVRFFSESEITGGFVRTKTILGRRIPFCHPPRLEKYVMTNVEALKKGQFKYREFWT
RLGDRVIRVIIAPVKNREGKLLGTLEIVEDLTDVVNNPEEVKKKILVL
>Mature_127_residues
TPEEIEGIFRALPLEVTYGDINDRVRFFSESEITGGFVRTKTILGRRIPFCHPPRLEKYVMTNVEALKKGQFKYREFWTR
LGDRVIRVIIAPVKNREGKLLGTLEIVEDLTDVVNNPEEVKKKILVL

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14847; Mature: 14715

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEEIEGIFRALPLEVTYGDINDRVRFFSESEITGGFVRTKTILGRRIPFCHPPRLEKY
CCHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH
VMTNVEALKKGQFKYREFWTRLGDRVIRVIIAPVKNREGKLLGTLEIVEDLTDVVNNPEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
VKKKILVL
HHHHHCCC
>Mature Secondary Structure 
TPEEIEGIFRALPLEVTYGDINDRVRFFSESEITGGFVRTKTILGRRIPFCHPPRLEKY
CHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH
VMTNVEALKKGQFKYREFWTRLGDRVIRVIIAPVKNREGKLLGTLEIVEDLTDVVNNPEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
VKKKILVL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA