| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is pstC [H]
Identifier: 218883380
GI number: 218883380
Start: 59668
End: 60270
Strand: Reverse
Name: pstC [H]
Synonym: DKAM_0066
Alternate gene names: 218883380
Gene position: 60270-59668 (Counterclockwise)
Preceding gene: 218883382
Following gene: 218883379
Centisome position: 4.41
GC content: 42.29
Gene sequence:
>603_bases TTGATCGAGGTAATGGGGGCTCTCCCAACCGTGGTCTATGGTTTGTGGGGAGGCTTTATTCTCTCACAGTTTCTATATAG TTCCATATATATACAGCTCCACGATTACCTAGACTATGTACCCTTATTCTCATGTAAACCGCTTAGTGGTCAAAATATTT TGTCCGCCGGCATAGTCTTAGGGTTATCGATGATCCCATATGCATCGTCACTGCTTATAGAAGGGTATAAATCTATTCCA TCCAGGTATATTGAGGCTGCATACTCGCTGGGCTTCTATAGGTTTGAAGTCTATAGATTAATAACTGGTATATTGAAGCC CCTGTTAATAGCTGCTATAATGCTCTCCCTAAGCCGGGCACTTGGTGAGACAACTATTGTTGCTTTAACAATTGGTAATG CATATATGGCATCTGCCTGCATGCTGAACCCGGGTACAACGATGTCTGCATGGATTGTAAGCCAGTTTGAGAGCTCTTTC CTATATCCTGGCGTCTCATCTATTCTATACGCTGGTGTATTGATTGTTATGATGCTCTCATTCATATCCAGCTCTATTGG TATAATGCTGATCAATAGGTGGAGGAGTATAATCCATGGCTAG
Upstream 100 bases:
>100_bases AGGCCTTGTATCAATCCTTATAGTTACACCCATATCATTATCCCTCACCTTCTTTATCTGCGACTTACTGCCGGGTAAGG CCTCGAGAATTTTTCACCGC
Downstream 100 bases:
>100_bases GGATGTAAGAAAGGTCATCAATATATTAGTGATCCTCATAATAATATTTTTAAGCGGGCTAGGTGTTCTCCCACTTCTCT GGCTTCTCTACAGCACTGTA
Product: phosphate ABC transporter, inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MIEVMGALPTVVYGLWGGFILSQFLYSSIYIQLHDYLDYVPLFSCKPLSGQNILSAGIVLGLSMIPYASSLLIEGYKSIP SRYIEAAYSLGFYRFEVYRLITGILKPLLIAAIMLSLSRALGETTIVALTIGNAYMASACMLNPGTTMSAWIVSQFESSF LYPGVSSILYAGVLIVMMLSFISSSIGIMLINRWRSIIHG
Sequences:
>Translated_200_residues MIEVMGALPTVVYGLWGGFILSQFLYSSIYIQLHDYLDYVPLFSCKPLSGQNILSAGIVLGLSMIPYASSLLIEGYKSIP SRYIEAAYSLGFYRFEVYRLITGILKPLLIAAIMLSLSRALGETTIVALTIGNAYMASACMLNPGTTMSAWIVSQFESSF LYPGVSSILYAGVLIVMMLSFISSSIGIMLINRWRSIIHG >Mature_200_residues MIEVMGALPTVVYGLWGGFILSQFLYSSIYIQLHDYLDYVPLFSCKPLSGQNILSAGIVLGLSMIPYASSLLIEGYKSIP SRYIEAAYSLGFYRFEVYRLITGILKPLLIAAIMLSLSRALGETTIVALTIGNAYMASACMLNPGTTMSAWIVSQFESSF LYPGVSSILYAGVLIVMMLSFISSSIGIMLINRWRSIIHG
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=200, Percent_Identity=32.5, Blast_Score=91, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 21928; Mature: 21928
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVMGALPTVVYGLWGGFILSQFLYSSIYIQLHDYLDYVPLFSCKPLSGQNILSAGIVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GLSMIPYASSLLIEGYKSIPSRYIEAAYSLGFYRFEVYRLITGILKPLLIAAIMLSLSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETTIVALTIGNAYMASACMLNPGTTMSAWIVSQFESSFLYPGVSSILYAGVLIVMMLS HCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FISSSIGIMLINRWRSIIHG HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEVMGALPTVVYGLWGGFILSQFLYSSIYIQLHDYLDYVPLFSCKPLSGQNILSAGIVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GLSMIPYASSLLIEGYKSIPSRYIEAAYSLGFYRFEVYRLITGILKPLLIAAIMLSLSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETTIVALTIGNAYMASACMLNPGTTMSAWIVSQFESSFLYPGVSSILYAGVLIVMMLS HCCCEEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FISSSIGIMLINRWRSIIHG HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]