| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is pstA [H]
Identifier: 218883379
GI number: 218883379
Start: 58827
End: 59675
Strand: Reverse
Name: pstA [H]
Synonym: DKAM_0065
Alternate gene names: 218883379
Gene position: 59675-58827 (Counterclockwise)
Preceding gene: 218883380
Following gene: 218883378
Centisome position: 4.37
GC content: 45.47
Gene sequence:
>849_bases ATGGCTAGGGATGTAAGAAAGGTCATCAATATATTAGTGATCCTCATAATAATATTTTTAAGCGGGCTAGGTGTTCTCCC ACTTCTCTGGCTTCTCTACAGCACTGTATTAAACGGGCTCCCTCCATTAATTATGAAGGGCCTATCATTCATTACAGGGC TTCCAGGGACACCCATGGATACCGATATAGGCGGCATCGCACCAGCGGTTGTGGGAACCCTTATCTCGTCTACGATAGCT ACCTTAATGGCTGTTGCCCTAGCTGTTTTCTCCTCGATGTTTACACGTGAATACCCATACTCGTTGGTAAGCGGGTTCAT TGAAACAGTGATTAGGGCTTTCAACGGGATACCCACTATAATAATCTCCATGTTCATCTACAGCATCATGGTTATACGAA TGGGGAGGCCGAGTATACTGGCTGGTTCACTAGCCCTCTTCATAGCCGTTCTCCCCACTGCACACTATTATCTCTCATCA GCGTTTAGAAGCGTTGAGGAGAAATACAGGGAGGCAGCTTTCTCACTAGGTTTTAAAAGAGTGCAATTGCTGAGATACGT GTACCTTGGAATAGCGAGGAGGCAGGTCGCCTCAGGCATCTTAATGACCTTCATAAGGTCAGCTGGTGAGACAGCCCCTC TCTTATTCACAATAGGTTTTCTAACAAATTCTGTTTTCCAGGGTATTGATCAACCCGGTAACGCGGTTTCACTATTGATC TTCAACTATGCATTATCCCCTTACAATAACTATCATATGGCTGCCTGGGGGGCGAGCCTCCTATTATTACTATTGATCCT TGTACCCGTCTTGTTCATCGAGTGGTTTGTGAAGGAGGTGAGGAAATAG
Upstream 100 bases:
>100_bases TCATCTATTCTATACGCTGGTGTATTGATTGTTATGATGCTCTCATTCATATCCAGCTCTATTGGTATAATGCTGATCAA TAGGTGGAGGAGTATAATCC
Downstream 100 bases:
>100_bases TGTCCCATATAGTGGAGACAAGGGATCTAACTATTAGGCTCGGTGGTAAAACAATATTGAATAAAGTGAATATATCCATT AGATGTAACACAATATCAGT
Product: phosphate ABC transporter, inner membrane subunit PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MARDVRKVINILVILIIIFLSGLGVLPLLWLLYSTVLNGLPPLIMKGLSFITGLPGTPMDTDIGGIAPAVVGTLISSTIA TLMAVALAVFSSMFTREYPYSLVSGFIETVIRAFNGIPTIIISMFIYSIMVIRMGRPSILAGSLALFIAVLPTAHYYLSS AFRSVEEKYREAAFSLGFKRVQLLRYVYLGIARRQVASGILMTFIRSAGETAPLLFTIGFLTNSVFQGIDQPGNAVSLLI FNYALSPYNNYHMAAWGASLLLLLLILVPVLFIEWFVKEVRK
Sequences:
>Translated_282_residues MARDVRKVINILVILIIIFLSGLGVLPLLWLLYSTVLNGLPPLIMKGLSFITGLPGTPMDTDIGGIAPAVVGTLISSTIA TLMAVALAVFSSMFTREYPYSLVSGFIETVIRAFNGIPTIIISMFIYSIMVIRMGRPSILAGSLALFIAVLPTAHYYLSS AFRSVEEKYREAAFSLGFKRVQLLRYVYLGIARRQVASGILMTFIRSAGETAPLLFTIGFLTNSVFQGIDQPGNAVSLLI FNYALSPYNNYHMAAWGASLLLLLLILVPVLFIEWFVKEVRK >Mature_281_residues ARDVRKVINILVILIIIFLSGLGVLPLLWLLYSTVLNGLPPLIMKGLSFITGLPGTPMDTDIGGIAPAVVGTLISSTIAT LMAVALAVFSSMFTREYPYSLVSGFIETVIRAFNGIPTIIISMFIYSIMVIRMGRPSILAGSLALFIAVLPTAHYYLSSA FRSVEEKYREAAFSLGFKRVQLLRYVYLGIARRQVASGILMTFIRSAGETAPLLFTIGFLTNSVFQGIDQPGNAVSLLIF NYALSPYNNYHMAAWGASLLLLLLILVPVLFIEWFVKEVRK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=269, Percent_Identity=28.996282527881, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30969; Mature: 30837
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDVRKVINILVILIIIFLSGLGVLPLLWLLYSTVLNGLPPLIMKGLSFITGLPGTPMD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC TDIGGIAPAVVGTLISSTIATLMAVALAVFSSMFTREYPYSLVSGFIETVIRAFNGIPTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH IISMFIYSIMVIRMGRPSILAGSLALFIAVLPTAHYYLSSAFRSVEEKYREAAFSLGFKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQLLRYVYLGIARRQVASGILMTFIRSAGETAPLLFTIGFLTNSVFQGIDQPGNAVSLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FNYALSPYNNYHMAAWGASLLLLLLILVPVLFIEWFVKEVRK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARDVRKVINILVILIIIFLSGLGVLPLLWLLYSTVLNGLPPLIMKGLSFITGLPGTPMD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC TDIGGIAPAVVGTLISSTIATLMAVALAVFSSMFTREYPYSLVSGFIETVIRAFNGIPTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH IISMFIYSIMVIRMGRPSILAGSLALFIAVLPTAHYYLSSAFRSVEEKYREAAFSLGFKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQLLRYVYLGIARRQVASGILMTFIRSAGETAPLLFTIGFLTNSVFQGIDQPGNAVSLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FNYALSPYNNYHMAAWGASLLLLLLILVPVLFIEWFVKEVRK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]