| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is mat [H]
Identifier: 218883338
GI number: 218883338
Start: 22483
End: 23748
Strand: Reverse
Name: mat [H]
Synonym: DKAM_0024
Alternate gene names: 218883338
Gene position: 23748-22483 (Counterclockwise)
Preceding gene: 218883339
Following gene: 218883333
Centisome position: 1.74
GC content: 44.39
Gene sequence:
>1266_bases ATGTTAAAGCCAGTAAGGGGGATAATTGTGGGAGGAAGCAGAAATATAGAAATAGAACTTTTAAGAATGACTAGTGTAAG CAGGATGAAGGTTGAACTAGTCGAGAGAAAAGGAGTAGGACACCCGGACTATATAGCTGACTCGGCAAGCGAGGCTGCTT CAAGAGCTCTTTCAAAGTACTATTTAAAAGAGTTTGGCACAATATTGCATCACAACCTCGACAAAACACTACTTGTCGGA GGACAGTCGAACCCCAGATTCGGCGGCGGCGCACTCTTAGAGCCTATATACATAGTAGTTGCAGGCAGGGCTACTACAGA GGTAAGAGTTGAGGATGGCATAGTTAAAGTACCCTTCGGTAAAATAATTATAGAGGCCGTTAAAGACTGGATTAAGAGGA ACATGAGATACCTGGATCCAGAGAGACACGTAATAGTGGACTATATGGTTAGAAAGGGTAGTACAGACCTCGTAACAGTA TTTGATGCAGGGAGATCATCCGTACCCCTTGCAAACGATACAAGTATCGGTGTAGGCTACGCCCCGCTTTCCACACTGGA AAAACTAGTACTACAGAGTGAGCGATTATTGAACAGTCCAGAGTTTAAATCCAGGGTACCAGCTGTAGGCGAAGACGTGA AAGTAATGGGTCTGAGAAGGAATAAGGATATAGTGTTAACAATAGCGGCTGCGATAGTCGACAGCGAGGTAAGAGATAAA TATGAATATCTGAAGGTTAAAGAAGACATAGTAAACGTTGTCTCAGACCTGGCTGGTAGAATAGCTCCAGATTATAATAT TAAAATACATGTAAACACGGCTGATATACCGGAGAAGAATAGCTTCTACCTAACAGTCACAGGCACCTCTGCCGAGCATG GAGACGATGGCGCAACCGGGCGGGGCAATCGTGCCAATGGATTAATCCCCCCTATGAGGCCTATAAGCCTTGAGGCGACT GCTGGGAAGAACCCTGTAAACCACGTGGGCAAGATATACAATGTGGTTGCTAGAAGGATAGCTGAGAGAGTATATGAAGT ATACAACGGCATATTCTCTGATGTATACGTGGAGCTATTGAGCCAGATCGGTAAGCCGATAGATCAACCGCTTGTCGCAA GCGTGAAATTGATTCCAAGTGATCTATCGATGAACGATATCCCCTCACACATCATGAGCGAGATCCATGGTATAGCAGAT GAAGAACTCACTAATATAAAGAGGGTCACCGAGATGGTTCTAAACGATCAAGTAACACTGTACTAA
Upstream 100 bases:
>100_bases CCCTCTAATGAGGATCGAACCCTAGCTGTTGCTCCTGGGAATTGTAACCTATTATAGTTAAACTTATATTCTATATTAGA CCTTCTTTAATCCTAGGTAC
Downstream 100 bases:
>100_bases GCTAGCTGTTTTTCCTAGACCTCTGATACTCTTCTATCATTCTCAATATTCTCTCATGTCTCTCCAACTCGATTAACTCA TCTATTTTACGCCAGAGCTC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MLKPVRGIIVGGSRNIEIELLRMTSVSRMKVELVERKGVGHPDYIADSASEAASRALSKYYLKEFGTILHHNLDKTLLVG GQSNPRFGGGALLEPIYIVVAGRATTEVRVEDGIVKVPFGKIIIEAVKDWIKRNMRYLDPERHVIVDYMVRKGSTDLVTV FDAGRSSVPLANDTSIGVGYAPLSTLEKLVLQSERLLNSPEFKSRVPAVGEDVKVMGLRRNKDIVLTIAAAIVDSEVRDK YEYLKVKEDIVNVVSDLAGRIAPDYNIKIHVNTADIPEKNSFYLTVTGTSAEHGDDGATGRGNRANGLIPPMRPISLEAT AGKNPVNHVGKIYNVVARRIAERVYEVYNGIFSDVYVELLSQIGKPIDQPLVASVKLIPSDLSMNDIPSHIMSEIHGIAD EELTNIKRVTEMVLNDQVTLY
Sequences:
>Translated_421_residues MLKPVRGIIVGGSRNIEIELLRMTSVSRMKVELVERKGVGHPDYIADSASEAASRALSKYYLKEFGTILHHNLDKTLLVG GQSNPRFGGGALLEPIYIVVAGRATTEVRVEDGIVKVPFGKIIIEAVKDWIKRNMRYLDPERHVIVDYMVRKGSTDLVTV FDAGRSSVPLANDTSIGVGYAPLSTLEKLVLQSERLLNSPEFKSRVPAVGEDVKVMGLRRNKDIVLTIAAAIVDSEVRDK YEYLKVKEDIVNVVSDLAGRIAPDYNIKIHVNTADIPEKNSFYLTVTGTSAEHGDDGATGRGNRANGLIPPMRPISLEAT AGKNPVNHVGKIYNVVARRIAERVYEVYNGIFSDVYVELLSQIGKPIDQPLVASVKLIPSDLSMNDIPSHIMSEIHGIAD EELTNIKRVTEMVLNDQVTLY >Mature_421_residues MLKPVRGIIVGGSRNIEIELLRMTSVSRMKVELVERKGVGHPDYIADSASEAASRALSKYYLKEFGTILHHNLDKTLLVG GQSNPRFGGGALLEPIYIVVAGRATTEVRVEDGIVKVPFGKIIIEAVKDWIKRNMRYLDPERHVIVDYMVRKGSTDLVTV FDAGRSSVPLANDTSIGVGYAPLSTLEKLVLQSERLLNSPEFKSRVPAVGEDVKVMGLRRNKDIVLTIAAAIVDSEVRDK YEYLKVKEDIVNVVSDLAGRIAPDYNIKIHVNTADIPEKNSFYLTVTGTSAEHGDDGATGRGNRANGLIPPMRPISLEAT AGKNPVNHVGKIYNVVARRIAERVYEVYNGIFSDVYVELLSQIGKPIDQPLVASVKLIPSDLSMNDIPSHIMSEIHGIAD EELTNIKRVTEMVLNDQVTLY
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP [H]
COG id: COG1812
COG function: function code E; Archaeal S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002795 - ProDom: PD011777 [H]
Pfam domain/function: PF01941 AdoMet_Synthase [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 46367; Mature: 46367
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPVRGIIVGGSRNIEIELLRMTSVSRMKVELVERKGVGHPDYIADSASEAASRALSKY CCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH YLKEFGTILHHNLDKTLLVGGQSNPRFGGGALLEPIYIVVAGRATTEVRVEDGIVKVPFG HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCEEECCHH KIIIEAVKDWIKRNMRYLDPERHVIVDYMVRKGSTDLVTVFDAGRSSVPLANDTSIGVGY HHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC APLSTLEKLVLQSERLLNSPEFKSRVPAVGEDVKVMGLRRNKDIVLTIAAAIVDSEVRDK CCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHH YEYLKVKEDIVNVVSDLAGRIAPDYNIKIHVNTADIPEKNSFYLTVTGTSAEHGDDGATG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC RGNRANGLIPPMRPISLEATAGKNPVNHVGKIYNVVARRIAERVYEVYNGIFSDVYVELL CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQIGKPIDQPLVASVKLIPSDLSMNDIPSHIMSEIHGIADEELTNIKRVTEMVLNDQVTL HHHCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE Y C >Mature Secondary Structure MLKPVRGIIVGGSRNIEIELLRMTSVSRMKVELVERKGVGHPDYIADSASEAASRALSKY CCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH YLKEFGTILHHNLDKTLLVGGQSNPRFGGGALLEPIYIVVAGRATTEVRVEDGIVKVPFG HHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCCEEECCHH KIIIEAVKDWIKRNMRYLDPERHVIVDYMVRKGSTDLVTVFDAGRSSVPLANDTSIGVGY HHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC APLSTLEKLVLQSERLLNSPEFKSRVPAVGEDVKVMGLRRNKDIVLTIAAAIVDSEVRDK CCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHH YEYLKVKEDIVNVVSDLAGRIAPDYNIKIHVNTADIPEKNSFYLTVTGTSAEHGDDGATG HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC RGNRANGLIPPMRPISLEATAGKNPVNHVGKIYNVVARRIAERVYEVYNGIFSDVYVELL CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQIGKPIDQPLVASVKLIPSDLSMNDIPSHIMSEIHGIADEELTNIKRVTEMVLNDQVTL HHHCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]