| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883333
Identifier: 218883333
GI number: 218883333
Start: 15112
End: 15957
Strand: Reverse
Name: 218883333
Synonym: DKAM_0019
Alternate gene names: NA
Gene position: 15957-15112 (Counterclockwise)
Preceding gene: 218883338
Following gene: 218883332
Centisome position: 1.17
GC content: 39.36
Gene sequence:
>846_bases GTGAACCCGGTCTTTGAAACAGTTTCAAAGGAGATAAGTATTCTTGTAAATAGACTCAGAGATCTCAAGGTGCCTGAATA CCGTATTTCAAGGATTGAGGAGATGATTAAAGCACTTAACTCCACTAGGACCCCGCAGATAGTTGCAAGAGATCTTTTTA ACACGTATGCCGGCTTCATATCACTAGTGAAAGAGCTTGAATCCGGGTTAGATAAAGGGGTTGATGAATTAGAAATATAT GTTTTCCTGGATAAAATCGAGGAAAAGCTGGCTGAGTTCATTAATATCACTAGAAAATCCTATGTCAGGGAGAAGATACA GCTTTCACTCCCATTATTAATGACCACGATTTCATTTGCCTTATTCATTTTGATAGACCCAGTTATCCCGGATATTATAT CCCTAGGCTTCTCCATCTTGGGCATGACCATCTTCTATTTCAATTCAACACTAGGCTTGTTAAGTGTTGTAGCTAATATA GTTTTAAACATTATGTTATCCCTCTACCTCAACGAGTTAAGGCTTGACATATTATTCCTAGAGGTAATAATCGCTTTTTC GGCAGTGCTCCACATATACATTATTAGGGAGTCCTCGAGTGTAGGATACATAGACCAGGTAGTTAAATCCCTTAAGGCCG TTGACACGCTTGTGGCATCCTATATTAAACCCATGGATGTCAGCGCCGTGGCAAGCCTATTAAGCACTATTCAGTCACAT TATAGCACTGATAAAATAGCTGAATTATTCAGGTATAAGGCCGTCGTTATGCTAATGAATGGCTATAGTATTGAAGAGGT TGAGAAAAGCTTGTTCAGAGCCAGTCCTGAGAAACAAATAACCTGA
Upstream 100 bases:
>100_bases CCTCATTCGTAGTTGACTTATATGCTGACCGGTGGATTAAGCTATTTAATCCCCTACTATATTTTGATCCCAAATAGTAA ACACGTCTAAGTGAGCCAGA
Downstream 100 bases:
>100_bases CTACTCAGTTAATGGTCCTTTGGAAACAAATCAGCTTTATATTGCTTTTTAACTAGTTAAAACATATTTGAGGCGATAAT CGTTTATGGTGGTTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT
Sequences:
>Translated_281_residues MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT >Mature_281_residues MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31838; Mature: 31838
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFI CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SLVKELESGLDKGVDELEIYVFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANIVLNIMLSLYLNELRLDILFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFI CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SLVKELESGLDKGVDELEIYVFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANIVLNIMLSLYLNELRLDILFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA