Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883333

Identifier: 218883333

GI number: 218883333

Start: 15112

End: 15957

Strand: Reverse

Name: 218883333

Synonym: DKAM_0019

Alternate gene names: NA

Gene position: 15957-15112 (Counterclockwise)

Preceding gene: 218883338

Following gene: 218883332

Centisome position: 1.17

GC content: 39.36

Gene sequence:

>846_bases
GTGAACCCGGTCTTTGAAACAGTTTCAAAGGAGATAAGTATTCTTGTAAATAGACTCAGAGATCTCAAGGTGCCTGAATA
CCGTATTTCAAGGATTGAGGAGATGATTAAAGCACTTAACTCCACTAGGACCCCGCAGATAGTTGCAAGAGATCTTTTTA
ACACGTATGCCGGCTTCATATCACTAGTGAAAGAGCTTGAATCCGGGTTAGATAAAGGGGTTGATGAATTAGAAATATAT
GTTTTCCTGGATAAAATCGAGGAAAAGCTGGCTGAGTTCATTAATATCACTAGAAAATCCTATGTCAGGGAGAAGATACA
GCTTTCACTCCCATTATTAATGACCACGATTTCATTTGCCTTATTCATTTTGATAGACCCAGTTATCCCGGATATTATAT
CCCTAGGCTTCTCCATCTTGGGCATGACCATCTTCTATTTCAATTCAACACTAGGCTTGTTAAGTGTTGTAGCTAATATA
GTTTTAAACATTATGTTATCCCTCTACCTCAACGAGTTAAGGCTTGACATATTATTCCTAGAGGTAATAATCGCTTTTTC
GGCAGTGCTCCACATATACATTATTAGGGAGTCCTCGAGTGTAGGATACATAGACCAGGTAGTTAAATCCCTTAAGGCCG
TTGACACGCTTGTGGCATCCTATATTAAACCCATGGATGTCAGCGCCGTGGCAAGCCTATTAAGCACTATTCAGTCACAT
TATAGCACTGATAAAATAGCTGAATTATTCAGGTATAAGGCCGTCGTTATGCTAATGAATGGCTATAGTATTGAAGAGGT
TGAGAAAAGCTTGTTCAGAGCCAGTCCTGAGAAACAAATAACCTGA

Upstream 100 bases:

>100_bases
CCTCATTCGTAGTTGACTTATATGCTGACCGGTGGATTAAGCTATTTAATCCCCTACTATATTTTGATCCCAAATAGTAA
ACACGTCTAAGTGAGCCAGA

Downstream 100 bases:

>100_bases
CTACTCAGTTAATGGTCCTTTGGAAACAAATCAGCTTTATATTGCTTTTTAACTAGTTAAAACATATTTGAGGCGATAAT
CGTTTATGGTGGTTTAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY
VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI
VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH
YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT

Sequences:

>Translated_281_residues
MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY
VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI
VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH
YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT
>Mature_281_residues
MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFISLVKELESGLDKGVDELEIY
VFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFALFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANI
VLNIMLSLYLNELRLDILFLEVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH
YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31838; Mature: 31838

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFI
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLVKELESGLDKGVDELEIYVFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANIVLNIMLSLYLNELRLDILFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPVFETVSKEISILVNRLRDLKVPEYRISRIEEMIKALNSTRTPQIVARDLFNTYAGFI
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLVKELESGLDKGVDELEIYVFLDKIEEKLAEFINITRKSYVREKIQLSLPLLMTTISFA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFILIDPVIPDIISLGFSILGMTIFYFNSTLGLLSVVANIVLNIMLSLYLNELRLDILFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVIIAFSAVLHIYIIRESSSVGYIDQVVKSLKAVDTLVASYIKPMDVSAVASLLSTIQSH
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YSTDKIAELFRYKAVVMLMNGYSIEEVEKSLFRASPEKQIT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA