Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883323

Identifier: 218883323

GI number: 218883323

Start: 6913

End: 7767

Strand: Direct

Name: 218883323

Synonym: DKAM_0009

Alternate gene names: NA

Gene position: 6913-7767 (Clockwise)

Preceding gene: 218883322

Following gene: 218883324

Centisome position: 0.51

GC content: 43.98

Gene sequence:

>855_bases
ATGAATAAGAGAGTTGCTGGCGTGGTATCGCTGGTGGTTGCGACTATACTTTGGGGTTCATCCTTCTCATTCATTAAGTT
ATCGGTAACAGACGTATCTCCTCTAACTTACTCATCTCTCAGATCATTTATCGCAGTAATATTGTTGACACCGATTATAT
TATTGAAAATGTATAGGGGAGTACTATCCATTAACAGCCTATATAAGGGGTTCATCGTGGGCATAGCATATTTCCTTGGC
TTGTTCCTTCAAGCAGCTGGAACAGTATATACAACACCATCTCTCAGCGCCTTCATAACCGGGCTTAACTCTGTACATGT
CCACCTATATATCGCACTCGTTGAAAGGAACTATGGTTTAATAGATGGTATAGCCCTTCTTTTAGCACTCTCCGGCCTAT
ATGTGTTAACCTCTCCGAGCGGTGGGTTAACCATAGGTGTGCTCCTTATTTTCATAGGATCTATTGCCTGGGCAGCCCAG
ATAATCCTGGTTTCCCGCTATGGATCCTCTAGTATAATAGAGATATTGTATGGCATGTTCTTACCGGGTGCGCTCACCTA
TCCCTTTGCATTAATTCTCGGGGGAGCTGTGGGCATCGAGGCTTTGATTTATATAACTTATCTCGCCGTAGCCTGCTCGG
TTCTGGCAACTTTTTTCCAGGTATGGGGTCAGAGATATGTTTCCCCTCTAACAGCTGCACTAATATTCCTGCTTGAACCA
GTTTTTGCCCTACTCTTCTCGCTGGCGATGGGGTTGGAGGGAATTGAACCATATAAAGTAATCGGGGGAGGATTAATAGT
AATAGCCACCTACCTCTCATCTATGGCCGAGTTATCCTCTAACTGGTTGAAATAA

Upstream 100 bases:

>100_bases
CTACTTGACTAATACTTTAAATTAAATGTGCTTCATATAATTTATTATGTGAAAACACGATGTCTCTTAATCAACTTAGA
GCAGACTTATAGGTGTCTCC

Downstream 100 bases:

>100_bases
AGAGTGGCATCCCTAAGTATAGCCATTCCGATGTTTCGACTTAAATTTATTTACTTAGCTAAGGTAATATTAAATCAAAG
AAGTGGAGGGTATTCCTTGA

Product: Permease of the drug/metabolite transporter (DMT) superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG
LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ
IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP
VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK

Sequences:

>Translated_284_residues
MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG
LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ
IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP
VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK
>Mature_284_residues
MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRGVLSINSLYKGFIVGIAYFLG
LFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGLIDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQ
IILVSRYGSSSIIEILYGMFLPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP
VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30374; Mature: 30374

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRG
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLSINSLYKGFIVGIAYFLGLFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCHHHHEEEEEEECCCCCH
IDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQIILVSRYGSSSIIEILYGMF
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK
HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRVAGVVSLVVATILWGSSFSFIKLSVTDVSPLTYSSLRSFIAVILLTPIILLKMYRG
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLSINSLYKGFIVGIAYFLGLFLQAAGTVYTTPSLSAFITGLNSVHVHLYIALVERNYGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCHHHHEEEEEEECCCCCH
IDGIALLLALSGLYVLTSPSGGLTIGVLLIFIGSIAWAAQIILVSRYGSSSIIEILYGMF
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LPGALTYPFALILGGAVGIEALIYITYLAVACSVLATFFQVWGQRYVSPLTAALIFLLEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFALLFSLAMGLEGIEPYKVIGGGLIVIATYLSSMAELSSNWLK
HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]