| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ilvA [H]
Identifier: 218711018
GI number: 218711018
Start: 3282244
End: 3283788
Strand: Direct
Name: ilvA [H]
Synonym: VS_3147
Alternate gene names: 218711018
Gene position: 3282244-3283788 (Clockwise)
Preceding gene: 218711017
Following gene: 218711020
Centisome position: 99.48
GC content: 48.54
Gene sequence:
>1545_bases ATGAGTGATGACACCTCCAGCCCCCAAAAACAAACTGGCGCAGATTATCTGCGTCAGATCCTGAGAGCGCCGGTTTACGA AGCGGCAATCGTGACACCTCTGCAGGATATGCCACGTTTAAGCGCGCGCATTGGTAATCAGGTTCAGCTTAAACGAGAAG ACCGTCAGCCGGTGCACTCGTTCAAGCTACGTGGTGCCTACAACATGGTATCAAGCCTTTCTGAACAACAGAAAGCCGCA GGTGTGATTGCTGCATCGGCAGGTAACCATGCTCAAGGTATGGCGCTGTCCGGTTCTAAGCTTGGTATTCAGACCACTAT TGTGATGCCAAAAACGACGCCGGATATCAAGGTTGATGCGGTACGCGGATTTGGTGGTAACGTGGTTCTGCACGGCAGTA ATTTCGATGAAGCAAAAGCGGAAGCGGAACGCCTATCGGCTGAACATGGCTTCACCTTTGTACCTCCTTTCGATCACCCA CTGGTGATTGCAGGGCAAGGTACTATGGGCATGGAGATGCTGCAGCAAAACGGTCACATGGATTATATCTTTGTGCCGGT TGGTGGTGGTGGCTTAGCCGCTGGTGTTGCAGTGCTTATCAAACAACTGATGCCAGAGATTAAAGTGATTGCGGTAGAGC CTGAAGACTCAGCTTGCTTGAAAGCAGCACTGGATGCGGGTGAACCAGTGGTACTGGATCAGGTCAGCATGTTTGCTGAT GGTGTTGCGGTTAAACGCATTGGTGAAGAAACCTTCCGTCTTTGCCAACAGTACATTGATGGTCATATTACAGTCTCTAG CGATGAAATCTGCTCTGCGGTAAAGGACATATTTGAAGACACCCGTGCAATTGCTGAGCCTTCAGGAGCGCTTGCTCTGG CAGGCCTTAAGAAGTTTGCAGAACAAAACCAACTGCAAAATAAGCAACTAGCAACGGTACTTTCTGGTGCGAACACCAAC TTCCACGGTCTGCGTTATGTCTCTGAGCGTTGTGAATTGGGTGAGAAGCGAGAAGGTCTACTTGCGGTGACTATTCCAGA ACGACAAGGTGCGTTCCTAGAGTTCTGTAACATTATTGGTGGTCGAGCGGTGACTGAGTTTAACTACCGCCACAACGACG AAAGCCTCGCGAATATCTTCGTTGGTGTACGTCTACAAGGTGGACAAGAAGAACTCGAACACATCATCAATGACTTACGT GAGGGTGACTACGCGGTTGTCGACTTGTCTGATGACGAGATGGCAAAACTTCATATTCGTTACATGATTGGCGGCAAACC ATCGAAACCATTGAAAGAGCGTCTGTACAGCTTTGAGTTCCCTGAATACCCAGGAGCATTGATTAAATTCCTTGATACCT TAGGGACTCACTGGAATATCAGCTTGTTCAACTATCGTAACCATGGTGCTGACTACGGTCGTGTGCTGTGTGGTTTTGAG CTGGGTGATGACGATTTGGCTCAGTTCTCTACGCATTTAGAAGAACTCGGCTACCAATGCAAAGATGAAACCGATAACCC TTCCTACAAGTTCTTCTTGTCTTAA
Upstream 100 bases:
>100_bases GTCAGCGTGAAGTGTCTTTCGCACTGAAAGCTTATGCAAGCATGGCGACCAGTGCCGACAAAGGCGCTGTACGTGATAAG TCTAAACTTGAGGGCTAACT
Downstream 100 bases:
>100_bases GAGTTAACGACCGAATCAAAAAAGAGCGAGTATTTACTCGCTCTTTTTATTGGTGCTGATTCAGTTCAAGCTTGAAAAGG ATCTTCTTGTAAATAGATCA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSDDTSSPQKQTGADYLRQILRAPVYEAAIVTPLQDMPRLSARIGNQVQLKREDRQPVHSFKLRGAYNMVSSLSEQQKAA GVIAASAGNHAQGMALSGSKLGIQTTIVMPKTTPDIKVDAVRGFGGNVVLHGSNFDEAKAEAERLSAEHGFTFVPPFDHP LVIAGQGTMGMEMLQQNGHMDYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFAD GVAVKRIGEETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIAEPSGALALAGLKKFAEQNQLQNKQLATVLSGANTN FHGLRYVSERCELGEKREGLLAVTIPERQGAFLEFCNIIGGRAVTEFNYRHNDESLANIFVGVRLQGGQEELEHIINDLR EGDYAVVDLSDDEMAKLHIRYMIGGKPSKPLKERLYSFEFPEYPGALIKFLDTLGTHWNISLFNYRNHGADYGRVLCGFE LGDDDLAQFSTHLEELGYQCKDETDNPSYKFFLS
Sequences:
>Translated_514_residues MSDDTSSPQKQTGADYLRQILRAPVYEAAIVTPLQDMPRLSARIGNQVQLKREDRQPVHSFKLRGAYNMVSSLSEQQKAA GVIAASAGNHAQGMALSGSKLGIQTTIVMPKTTPDIKVDAVRGFGGNVVLHGSNFDEAKAEAERLSAEHGFTFVPPFDHP LVIAGQGTMGMEMLQQNGHMDYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFAD GVAVKRIGEETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIAEPSGALALAGLKKFAEQNQLQNKQLATVLSGANTN FHGLRYVSERCELGEKREGLLAVTIPERQGAFLEFCNIIGGRAVTEFNYRHNDESLANIFVGVRLQGGQEELEHIINDLR EGDYAVVDLSDDEMAKLHIRYMIGGKPSKPLKERLYSFEFPEYPGALIKFLDTLGTHWNISLFNYRNHGADYGRVLCGFE LGDDDLAQFSTHLEELGYQCKDETDNPSYKFFLS >Mature_513_residues SDDTSSPQKQTGADYLRQILRAPVYEAAIVTPLQDMPRLSARIGNQVQLKREDRQPVHSFKLRGAYNMVSSLSEQQKAAG VIAASAGNHAQGMALSGSKLGIQTTIVMPKTTPDIKVDAVRGFGGNVVLHGSNFDEAKAEAERLSAEHGFTFVPPFDHPL VIAGQGTMGMEMLQQNGHMDYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADG VAVKRIGEETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIAEPSGALALAGLKKFAEQNQLQNKQLATVLSGANTNF HGLRYVSERCELGEKREGLLAVTIPERQGAFLEFCNIIGGRAVTEFNYRHNDESLANIFVGVRLQGGQEELEHIINDLRE GDYAVVDLSDDEMAKLHIRYMIGGKPSKPLKERLYSFEFPEYPGALIKFLDTLGTHWNISLFNYRNHGADYGRVLCGFEL GDDDLAQFSTHLEELGYQCKDETDNPSYKFFLS
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=294, Percent_Identity=34.0136054421769, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI19923959, Length=270, Percent_Identity=32.962962962963, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI33469958, Length=320, Percent_Identity=26.5625, Blast_Score=100, Evalue=6e-21, Organism=Escherichia coli, GI1790207, Length=514, Percent_Identity=69.0661478599222, Blast_Score=722, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=295, Percent_Identity=38.9830508474576, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71991565, Length=375, Percent_Identity=32.5333333333333, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17537387, Length=380, Percent_Identity=31.8421052631579, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17508781, Length=254, Percent_Identity=35.8267716535433, Blast_Score=145, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6320930, Length=521, Percent_Identity=48.1765834932822, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6322631, Length=297, Percent_Identity=37.7104377104377, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319788, Length=271, Percent_Identity=25.4612546125461, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355833, Length=375, Percent_Identity=32.5333333333333, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24645328, Length=311, Percent_Identity=29.2604501607717, Blast_Score=109, Evalue=5e-24,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56307; Mature: 56176
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDTSSPQKQTGADYLRQILRAPVYEAAIVTPLQDMPRLSARIGNQVQLKREDRQPVHS CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHH FKLRGAYNMVSSLSEQQKAAGVIAASAGNHAQGMALSGSKLGIQTTIVMPKTTPDIKVDA HHHCHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEE VRGFGGNVVLHGSNFDEAKAEAERLSAEHGFTFVPPFDHPLVIAGQGTMGMEMLQQNGHM EECCCCCEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEECCCCHHHHHHHHCCCE DYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFAD EEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHC GVAVKRIGEETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIAEPSGALALAGLKKFA CHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EQNQLQNKQLATVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERQGAFLEFCNIIG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHC GRAVTEFNYRHNDESLANIFVGVRLQGGQEELEHIINDLREGDYAVVDLSDDEMAKLHIR CCEEEECCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE YMIGGKPSKPLKERLYSFEFPEYPGALIKFLDTLGTHWNISLFNYRNHGADYGRVLCGFE EEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEE LGDDDLAQFSTHLEELGYQCKDETDNPSYKFFLS CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure SDDTSSPQKQTGADYLRQILRAPVYEAAIVTPLQDMPRLSARIGNQVQLKREDRQPVHS CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCHHH FKLRGAYNMVSSLSEQQKAAGVIAASAGNHAQGMALSGSKLGIQTTIVMPKTTPDIKVDA HHHCHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEE VRGFGGNVVLHGSNFDEAKAEAERLSAEHGFTFVPPFDHPLVIAGQGTMGMEMLQQNGHM EECCCCCEEEECCCCCHHHHHHHHHHHHCCEEECCCCCCCEEEECCCCHHHHHHHHCCCE DYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFAD EEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHC GVAVKRIGEETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIAEPSGALALAGLKKFA CHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EQNQLQNKQLATVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERQGAFLEFCNIIG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHC GRAVTEFNYRHNDESLANIFVGVRLQGGQEELEHIINDLREGDYAVVDLSDDEMAKLHIR CCEEEECCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE YMIGGKPSKPLKERLYSFEFPEYPGALIKFLDTLGTHWNISLFNYRNHGADYGRVLCGFE EEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEE LGDDDLAQFSTHLEELGYQCKDETDNPSYKFFLS CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]