Click here to switch to the map view.

The map label for this gene is 218710972

Identifier: 218710972

GI number: 218710972

Start: 3231407

End: 3232267

Strand: Direct

Name: 218710972

Synonym: VS_3086

Alternate gene names: NA

Gene position: 3231407-3232267 (Clockwise)

Preceding gene: 218710971

Following gene: 218710973

Centisome position: 97.94

GC content: 45.99

Gene sequence:

>861_bases
GTGACTCAAACTCTTCACCCCAACACAGGGGTTGGCCTTAGAACACCGCACTTGGACTTCTTTAGCCAAAACCCAGCCTT
AGTGAGTTGGTTAGAGGTGCACAGCGAGAACTACTTTTTAACTCAATCACCGCAACGTCAGCAACTCAGAGAAATTCGTA
ACGCCCACAACATAAGTTGTCACGGTGTTGGGTTGTCTCTAGGTTCTGTTGAGCGCATCAACTCAAATCACTTACTGCAG
TTAAAAGATCTGATTGATGATATCGAGCCTTTCTTGGTTTCTGAGCACCTCAGCTGGAGTCAGACCGGCGGCCATTACTT
CAATGATTTATTACCGCTGCCCTATACCGAAGAGGCGTTGGAAGTCTTCTGTCGCAATGTCATCGAGGTTCAAGATAGCC
TGCAACGCCCAATGCTGATTGAGAACCCATCGAGTTACCTCGCCTTCAAGCATTCAACGATCCCAGAATGGGAGTTTTTA
GCCGAGGTACAGAAGCGCACCGAATGTCGCCTCTTACTCGATTTCAATAATATTTTTGTCTCATCTTTTAATCATGGTTT
CAGCTGTGAAGAGTACTTAAGCGGAATACCTGCAGACAAAGTGGAAGAGATTCACTTGGCAGGTTTTACCAAAAAGAAAC
TCGAACAAGGTGAGATCTGGATAGACACCCACAGTAAACCAGTCTGTGACGAAGTGTGGCAACTCTACACACAATGGATA
GCACAACATGGTTTGCGCCACACCTTGATTGAGTGGGATCTAGACATCCCAGAACCACAAGTCTTATTGGCTGAAGCAAC
CAAAGCCAGTGATATCTTGTATCAACACGACAAGTTCAACCAAAGGAGTCGCGCATCATGA

Upstream 100 bases:

>100_bases
GGCAAATTATCAGGTGGTAACACTCAATCATCATAATTGAGCTGCTTAGCATGGTGAGCTGACATTCAGCTCACCTCCAC
TTCTTATTAGGAGAATCGTT

Downstream 100 bases:

>100_bases
GCCACTCTTTAGCTAATGTGCAATCGGAGTTTGCGAACGCGTTACGCTACCAAAACAATGGTGAGCATTGCGACATAGTG
AGCGACCATTTTACTGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTQTLHPNTGVGLRTPHLDFFSQNPALVSWLEVHSENYFLTQSPQRQQLREIRNAHNISCHGVGLSLGSVERINSNHLLQ
LKDLIDDIEPFLVSEHLSWSQTGGHYFNDLLPLPYTEEALEVFCRNVIEVQDSLQRPMLIENPSSYLAFKHSTIPEWEFL
AEVQKRTECRLLLDFNNIFVSSFNHGFSCEEYLSGIPADKVEEIHLAGFTKKKLEQGEIWIDTHSKPVCDEVWQLYTQWI
AQHGLRHTLIEWDLDIPEPQVLLAEATKASDILYQHDKFNQRSRAS

Sequences:

>Translated_286_residues
MTQTLHPNTGVGLRTPHLDFFSQNPALVSWLEVHSENYFLTQSPQRQQLREIRNAHNISCHGVGLSLGSVERINSNHLLQ
LKDLIDDIEPFLVSEHLSWSQTGGHYFNDLLPLPYTEEALEVFCRNVIEVQDSLQRPMLIENPSSYLAFKHSTIPEWEFL
AEVQKRTECRLLLDFNNIFVSSFNHGFSCEEYLSGIPADKVEEIHLAGFTKKKLEQGEIWIDTHSKPVCDEVWQLYTQWI
AQHGLRHTLIEWDLDIPEPQVLLAEATKASDILYQHDKFNQRSRAS
>Mature_285_residues
TQTLHPNTGVGLRTPHLDFFSQNPALVSWLEVHSENYFLTQSPQRQQLREIRNAHNISCHGVGLSLGSVERINSNHLLQL
KDLIDDIEPFLVSEHLSWSQTGGHYFNDLLPLPYTEEALEVFCRNVIEVQDSLQRPMLIENPSSYLAFKHSTIPEWEFLA
EVQKRTECRLLLDFNNIFVSSFNHGFSCEEYLSGIPADKVEEIHLAGFTKKKLEQGEIWIDTHSKPVCDEVWQLYTQWIA
QHGLRHTLIEWDLDIPEPQVLLAEATKASDILYQHDKFNQRSRAS

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 33059; Mature: 32927

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTLHPNTGVGLRTPHLDFFSQNPALVSWLEVHSENYFLTQSPQRQQLREIRNAHNISC
CCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCEE
HGVGLSLGSVERINSNHLLQLKDLIDDIEPFLVSEHLSWSQTGGHYFNDLLPLPYTEEAL
EEECCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHH
EVFCRNVIEVQDSLQRPMLIENPSSYLAFKHSTIPEWEFLAEVQKRTECRLLLDFNNIFV
HHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHEE
SSFNHGFSCEEYLSGIPADKVEEIHLAGFTKKKLEQGEIWIDTHSKPVCDEVWQLYTQWI
ECCCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
AQHGLRHTLIEWDLDIPEPQVLLAEATKASDILYQHDKFNQRSRAS
HHCCCHHEEEEECCCCCCCCEEEEHHCHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
TQTLHPNTGVGLRTPHLDFFSQNPALVSWLEVHSENYFLTQSPQRQQLREIRNAHNISC
CCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCEE
HGVGLSLGSVERINSNHLLQLKDLIDDIEPFLVSEHLSWSQTGGHYFNDLLPLPYTEEAL
EEECCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHH
EVFCRNVIEVQDSLQRPMLIENPSSYLAFKHSTIPEWEFLAEVQKRTECRLLLDFNNIFV
HHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHEE
SSFNHGFSCEEYLSGIPADKVEEIHLAGFTKKKLEQGEIWIDTHSKPVCDEVWQLYTQWI
ECCCCCCCHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
AQHGLRHTLIEWDLDIPEPQVLLAEATKASDILYQHDKFNQRSRAS
HHCCCHHEEEEECCCCCCCCEEEEHHCHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]