| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710962
Identifier: 218710962
GI number: 218710962
Start: 3220429
End: 3220740
Strand: Reverse
Name: 218710962
Synonym: VS_3076
Alternate gene names: NA
Gene position: 3220740-3220429 (Counterclockwise)
Preceding gene: 218710963
Following gene: 218710961
Centisome position: 97.62
GC content: 40.71
Gene sequence:
>312_bases ATGACAACACCAACAGAATTTGGCTTAAGAGAGTATTTGGCTGAGGAAGGGCGTTTATTGATTACGTCTCCAAGTTTTGA TTTTGATTCTTATGAAGTGCTAGGTGAAAAGCTGGTGGCATTACTGTCAGCGTCAGTTGTTGAAAAGCAATGGGACGCCG ATATGCATTCTTGGTTGATTGATTTTGAAGATTGTCGAATGTTTTTAAAGTCTGAGCATTACAGCGAATCAATTTGGTTT GAGTCGCTAAACGCTGAAGAAAGCCGAGAAGAGTTCGATTATCTCGCGACGCTTTTCAAGCGTGGTTTCTAA
Upstream 100 bases:
>100_bases CACATCACCACACACGGTTAATTGGCTGATTGCTAGTTTTCAAAAGTGTTTAGCTTATAAAAACGATTAGTTCATAAAAA AGAATAAGGTTGATAGGGAC
Downstream 100 bases:
>100_bases CTTTTAGCATGGCTTCTGAAACGTAGCTTCTAAACCTGGCTTTTAAAACTTGGCTTCTAACGTCATTCATCAATAAAAGT GAGGATAAACGTTTGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTTPTEFGLREYLAEEGRLLITSPSFDFDSYEVLGEKLVALLSASVVEKQWDADMHSWLIDFEDCRMFLKSEHYSESIWF ESLNAEESREEFDYLATLFKRGF
Sequences:
>Translated_103_residues MTTPTEFGLREYLAEEGRLLITSPSFDFDSYEVLGEKLVALLSASVVEKQWDADMHSWLIDFEDCRMFLKSEHYSESIWF ESLNAEESREEFDYLATLFKRGF >Mature_102_residues TTPTEFGLREYLAEEGRLLITSPSFDFDSYEVLGEKLVALLSASVVEKQWDADMHSWLIDFEDCRMFLKSEHYSESIWFE SLNAEESREEFDYLATLFKRGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12123; Mature: 11991
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTEFGLREYLAEEGRLLITSPSFDFDSYEVLGEKLVALLSASVVEKQWDADMHSWLI CCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DFEDCRMFLKSEHYSESIWFESLNAEESREEFDYLATLFKRGF HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPTEFGLREYLAEEGRLLITSPSFDFDSYEVLGEKLVALLSASVVEKQWDADMHSWLI CCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DFEDCRMFLKSEHYSESIWFESLNAEESREEFDYLATLFKRGF HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA