BacMap

Definition	Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession	NC_011753
Length	3,299,303

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The map label for this gene is rhlB

Identifier: 218710959

GI number: 218710959

Start: 3216575

End: 3217885

Strand: Direct

Name: rhlB

Synonym: VS_3073

Alternate gene names: 218710959

Gene position: 3216575-3217885 (Clockwise)

Preceding gene: 218710952

Following gene: 218710960

Centisome position: 97.49

GC content: 48.13

Gene sequence:

>1311_bases
ATGAAAAAGACGCATATCACAGAGCAAAAGTTCGCCGACTTGGATTTACTTCCGCAAGTCATTGAAGGATTGGAGAAAAA
AGGGTTCGACTATTGTACCCCTATCCAAGCCTTGGCGCTCCCGGTACTGCTCACCGGCCAAGACATTGCAGGCCAGGCCC
AAACGGGTACTGGTAAAACGCTTGCGTTTCTTACTGCTACTTTTAATCACCTGCTAAAAACACCTGAGCATGAAGGCCGT
AAGCCTAACCAGCCACGTGCGATTATTATGGCACCAACGCGTGAACTCGCGATTCAGATCTACAACGATGCTGACTCTCT
GGTTGCAAGCACAGGTATCAAGGCAGCATTAGCTTACGGTGGCGAAAGCTACGACAAGCAACTAGGTAAGATCGAAGAAG
GCGCTGATATCTTAATTGGTACGACTGGCCGCATCATCGATTTCTACAAGCAAAAGGTATTTAACCTTAACCACATTCAA
GCAGTTGTTCTTGACGAAGCTGATCGCATGTTCGATCTTGGTTTCATCAAAGACATCCGCTTCTTGTTCCGTCGTATGCC
TGAGCCAAAAGATCGCCTAAACATGTTGTTCTCTGCGACACTGTCTTACCGCGTACAAGAACTTGCATTCGAACATATGC
ACAACCCAGAGCACGTGGTTGTTGAACCTGAGCGCAAGACTGGTCACCGTATTCAAGAAGAGCTGTTCTACCCTTCTAAC
GAACATAAGATGGCTCTTTTACAAACGTTAATCGAAGAAGAGTGGCCAGATCGCGCAATCATCTTCGCTAACACTAAGCA
CAAGTGTGAATCAGTTTGGGGCCACTTGGCTGCCGATGGTCACCGTGTTGGCCTACTAACTGGCGATGTTCCTCAGAAGA
AACGTGAAAAAATTCTTGAGCAGTTCACCAAAGGTGATGTTGACCTGCTTGTCGCAACAGATGTTGCAGCACGTGGCCTA
CACATCCCTCAAGTAACACACGTATTCAACTTTGACCTACCTGACGATTGTGAAGATTACGTTCACCGTATCGGCCGTAC
AGGTCGTGCTGGTGAAAGCGGTCACTCGATCAGCTTTGCTTGTGAAGATTACGCAATCAACTTGCCACCAATCGAAGAAT
ACATTGAGCACGCTATCCCAATGTCTGACTACGATGCTTCTGCACTACTGGAAGATCTGCCAGCACCGATGCGCTTACGT
ACACGTAACCCGCAACAACGCCGCTCAAACAACAATGGCCCACGCAACGGTAACCGTAAACCAAACCAGAATCGTCGCCC
ACGCCAACCGCGTCATAACAAGGAAGCTTAG

Upstream 100 bases:

>100_bases
ATGTGTTTTTTAGAACTGGTTGGATGATAACCAGTAAATAGATGCCCTATTGGAATGTATTTACTTTCGTATTGCAAGCT
TAAGCTGATATTCTATAGCA

Downstream 100 bases:

>100_bases
TCGCTTATGAGTCAAACAGTGTCACCACCGCTTTATGCTGCAATCGACCTCGGGTCGAACAGTTTTCATATGCTCGTTGT
GCGTCATATCGATGGCAGCG

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLKTPEHEGR
KPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYGGESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDLLVATDVAARGL
HIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFACEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLR
TRNPQQRRSNNNGPRNGNRKPNQNRRPRQPRHNKEA

Sequences:

>Translated_436_residues
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLKTPEHEGR
KPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYGGESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDLLVATDVAARGL
HIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFACEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLR
TRNPQQRRSNNNGPRNGNRKPNQNRRPRQPRHNKEA
>Mature_436_residues
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLKTPEHEGR
KPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYGGESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDLLVATDVAARGL
HIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFACEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLR
TRNPQQRRSNNNGPRNGNRKPNQNRRPRQPRHNKEA

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=38.2113821138211, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI45446747, Length=346, Percent_Identity=36.9942196531792, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI45446743, Length=346, Percent_Identity=36.9942196531792, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=36.0335195530726, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=36.0335195530726, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=36.0335195530726, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=36.0335195530726, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=35.7702349869452, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=34.7826086956522, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=34.7826086956522, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=34.7826086956522, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=34.7826086956522, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=34.7826086956522, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=34.6774193548387, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI148613856, Length=348, Percent_Identity=36.4942528735632, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI38201710, Length=348, Percent_Identity=36.4942528735632, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=36.1344537815126, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI20149629, Length=421, Percent_Identity=33.4916864608076, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=35.7746478873239, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=35.1274787535411, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI55749865, Length=399, Percent_Identity=32.3308270676692, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI7661920, Length=381, Percent_Identity=32.8083989501312, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI51094101, Length=363, Percent_Identity=32.7823691460055, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI164419743, Length=363, Percent_Identity=32.7823691460055, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI13129006, Length=373, Percent_Identity=34.0482573726542, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI41327776, Length=421, Percent_Identity=32.0665083135392, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI50659095, Length=408, Percent_Identity=32.5980392156863, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=29.973474801061, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI188035877, Length=357, Percent_Identity=32.2128851540616, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI41327779, Length=395, Percent_Identity=32.1518987341772, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=30.3116147308782, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI38569503, Length=374, Percent_Identity=29.9465240641711, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI38569505, Length=374, Percent_Identity=29.9465240641711, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI8922886, Length=393, Percent_Identity=32.0610687022901, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI6005743, Length=393, Percent_Identity=32.0610687022901, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=29.9719887955182, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=29.9719887955182, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI17505907, Length=407, Percent_Identity=29.4840294840295, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI83700235, Length=382, Percent_Identity=32.9842931937173, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=29.4117647058824, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.4396782841823, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI38327634, Length=381, Percent_Identity=30.4461942257218, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI31542656, Length=394, Percent_Identity=30.7106598984772, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.5508021390374, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI62241022, Length=374, Percent_Identity=32.0855614973262, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=31.728045325779, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI256223453, Length=394, Percent_Identity=26.6497461928934, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=28.3544303797468, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=32.4404761904762, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=27.4752475247525, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI9966805, Length=316, Percent_Identity=31.0126582278481, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=34.5454545454545, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI154759257, Length=416, Percent_Identity=27.1634615384615, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1790214, Length=425, Percent_Identity=71.5294117647059, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=38.2749326145553, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI87082221, Length=384, Percent_Identity=36.71875, Blast_Score=241, Evalue=6e-65,
Organism=Escherichia coli, GI1788930, Length=391, Percent_Identity=36.3171355498721, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787605, Length=389, Percent_Identity=32.9048843187661, Blast_Score=199, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.2920110192837, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=38.2920110192837, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=38.2920110192837, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=38.2920110192837, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=340, Percent_Identity=37.9411764705882, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=415, Percent_Identity=33.2530120481928, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=34.0540540540541, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507877, Length=378, Percent_Identity=35.7142857142857, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=34.6883468834688, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=30.9711286089239, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=35.2785145888594, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=34.1597796143251, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=34.8703170028818, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71995724, Length=381, Percent_Identity=31.758530183727, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17507121, Length=381, Percent_Identity=31.758530183727, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=33.2402234636872, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=348, Percent_Identity=36.7816091954023, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=33.6043360433604, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=32.0809248554913, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.0809248554913, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=34.0482573726542, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=401, Percent_Identity=30.9226932668329, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=31.331592689295, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=31.331592689295, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17552114, Length=368, Percent_Identity=30.9782608695652, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17505370, Length=356, Percent_Identity=32.5842696629214, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17508543, Length=362, Percent_Identity=28.7292817679558, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=31.0991957104558, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=29.6918767507003, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=30.8093994778068, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=28.0112044817927, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17536099, Length=386, Percent_Identity=31.3471502590674, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=31.266149870801, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=31.2020460358056, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=30.3523035230352, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=27.3972602739726, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=23.5436893203883, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=464, Percent_Identity=25.8620689655172, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=25.9887005649718, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=28.8288288288288, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=348, Percent_Identity=22.9885057471264, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17557982, Length=360, Percent_Identity=23.6111111111111, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=44.5652173913043, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=38.4615384615385, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6325138, Length=350, Percent_Identity=36.5714285714286, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=36.5994236311239, Blast_Score=224, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=341, Percent_Identity=36.6568914956012, Blast_Score=212, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=384, Percent_Identity=35.4166666666667, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=34.3406593406593, Blast_Score=205, Evalue=9e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=34.1666666666667, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=31.1170212765957, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6320173, Length=441, Percent_Identity=29.0249433106576, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=374, Percent_Identity=32.8877005347594, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6322912, Length=384, Percent_Identity=32.8125, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6322323, Length=384, Percent_Identity=32.8125, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6324620, Length=393, Percent_Identity=32.5699745547074, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=33.879781420765, Blast_Score=173, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=364, Percent_Identity=29.6703296703297, Blast_Score=169, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=434, Percent_Identity=28.8018433179723, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=30.4582210242588, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=368, Percent_Identity=31.7934782608696, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=31.1053984575836, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=28.9325842696629, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6323306, Length=431, Percent_Identity=26.2180974477958, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6322876, Length=454, Percent_Identity=29.0748898678414, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6319618, Length=403, Percent_Identity=28.0397022332506, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.1494252873563, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=25.0620347394541, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=37.7464788732394, Blast_Score=231, Evalue=9e-61,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=35.8974358974359, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=35.9459459459459, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=38.2113821138211, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=34.1597796143251, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=34.1597796143251, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=34.1597796143251, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=34.1597796143251, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=34.435261707989, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=34.1597796143251, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=34.1597796143251, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=35.8757062146893, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=37.2093023255814, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=37.2549019607843, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=35.1351351351351, Blast_Score=212, Evalue=3e-55,
Organism=Drosophila melanogaster, GI18857967, Length=442, Percent_Identity=32.579185520362, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=33.2409972299169, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24645031, Length=381, Percent_Identity=32.5459317585302, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI28575014, Length=382, Percent_Identity=31.413612565445, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=31.0991957104558, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24585582, Length=375, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24582080, Length=378, Percent_Identity=32.2751322751323, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24582078, Length=378, Percent_Identity=32.2751322751323, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17136248, Length=378, Percent_Identity=32.2751322751323, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24582075, Length=378, Percent_Identity=32.2751322751323, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24583281, Length=402, Percent_Identity=27.6119402985075, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24583279, Length=402, Percent_Identity=27.6119402985075, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=35.7377049180328, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=32.378223495702, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=32.378223495702, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=31.5789473684211, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=32.409972299169, Blast_Score=164, Evalue=8e-41,
Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=31.4763231197772, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=31.4763231197772, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=31.4763231197772, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI21355559, Length=392, Percent_Identity=29.3367346938776, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24642822, Length=419, Percent_Identity=28.8782816229117, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=31.4285714285714, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI20130173, Length=428, Percent_Identity=28.9719626168224, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24643725, Length=381, Percent_Identity=27.5590551181102, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=32.8267477203647, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=34.1991341991342, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=34.1991341991342, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI17136666, Length=399, Percent_Identity=25.8145363408521, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24640164, Length=341, Percent_Identity=24.0469208211144, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHLB_VIBSL (B7VME9)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418580.1
- ProteinModelPortal:   B7VME9
- SMR:   B7VME9
- GeneID:   7162526
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_3073
- HOGENOM:   HBG737336
- OMA:   SRLNMLF
- ProtClustDB:   PRK04837
- HAMAP:   MF_00661
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 49401; Mature: 49401

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKT
CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCC
LAFLTATFNHLLKTPEHEGRKPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHCHHHHHHCC
GESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQAVVLDEADRMFDLGFIKDIR
CCHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCC
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILE
CHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
QFTKGDVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFA
HHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLRTRNPQQRRSNNNGPRNGNRK
ECCCEECCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCC
PNQNRRPRQPRHNKEA
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTHITEQKFADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKT
CCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCC
LAFLTATFNHLLKTPEHEGRKPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHCHHHHHHCC
GESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQAVVLDEADRMFDLGFIKDIR
CCHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMHNPEHVVVEPERKTGHRIQEELFYPSN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCC
EHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILE
CHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
QFTKGDVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFA
HHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLRTRNPQQRRSNNNGPRNGNRK
ECCCEECCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCC
PNQNRRPRQPRHNKEA
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA