Click here to switch to the map view.

The map label for this gene is yigA [H]

Identifier: 218710943

GI number: 218710943

Start: 3193590

End: 3194288

Strand: Reverse

Name: yigA [H]

Synonym: VS_3046

Alternate gene names: 218710943

Gene position: 3194288-3193590 (Counterclockwise)

Preceding gene: 218710944

Following gene: 218710942

Centisome position: 96.82

GC content: 43.35

Gene sequence:

>699_bases
TTGTCTTACGTTGAAGGCGACACTCTGACTGCAGAGGTGGTTGCGGAATATTTACGTGATAACCCAGATTTCTTTCAAAA
CAGGAAAGATTTGGTTGATCGCCTTGCTATTAATAATGTTGAGCAGGGCGCTGTTTCTCTGGTTGAGATTCAGCTTAAAC
GTCAGCGTCATAGAATCGAAGAGCTGGAAGAAGAGATCACTGGCCTGATGTCACTAGCGGCGAATAACGATAAAACTTTC
TATGAATTCATGGATCTGCAAACTCAAGTGTTGAAATGCAGTGACTTCATTCAGGTTATCAAGGCTGTTGAACAAAAAGC
GTTGGAACTAGGGCTTAAGGCTCATGTACGAGTTCTCTCACAATTAGGTTTTTATCAGCTGAATGAAGAGCGTTACTCGA
AATTTTCACTTAACCATTTCAATGGCAAAGATGCTTATCTAGGGCGATTGAGAAAGGCAGACAGACACGATTTGTTTGGT
GATTATCCAGTTCCAGAGCTAGGCTCTTATGTAGTGCTACCCCTTGCTAAGCGATCTCCACTGGGTGTACTCGCTTTTTC
TAGTGAAGATGGCGGACACTTCCAGCCTCATATGGACACGCTCTTTTTACGCCATTTAGCACTTGTTGTCGCTCATTTGG
CGGACACCTTACCTTGGCAGATAAATAATGAGCCTAGAGCCCAAAATACCTCTTCCTAA

Upstream 100 bases:

>100_bases
CCTCTGTTGATGACTGGCCCAGCAACGCATGTGTTTGATGGTCAGCTTTCTTGCTAATAACGATATAACAAATAGATTTA
TAAAAAATAAAGGATAGGTT

Downstream 100 bases:

>100_bases
TAGCCTTCAAAAGCCGCTCTCTCGCTTCTATGAATATCTTAGAAGTGAGAAGGGACTCAGCTTACACACCCAACGTAACT
ACAAACAACAACTTGAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSYVEGDTLTAEVVAEYLRDNPDFFQNRKDLVDRLAINNVEQGAVSLVEIQLKRQRHRIEELEEEITGLMSLAANNDKTF
YEFMDLQTQVLKCSDFIQVIKAVEQKALELGLKAHVRVLSQLGFYQLNEERYSKFSLNHFNGKDAYLGRLRKADRHDLFG
DYPVPELGSYVVLPLAKRSPLGVLAFSSEDGGHFQPHMDTLFLRHLALVVAHLADTLPWQINNEPRAQNTSS

Sequences:

>Translated_232_residues
MSYVEGDTLTAEVVAEYLRDNPDFFQNRKDLVDRLAINNVEQGAVSLVEIQLKRQRHRIEELEEEITGLMSLAANNDKTF
YEFMDLQTQVLKCSDFIQVIKAVEQKALELGLKAHVRVLSQLGFYQLNEERYSKFSLNHFNGKDAYLGRLRKADRHDLFG
DYPVPELGSYVVLPLAKRSPLGVLAFSSEDGGHFQPHMDTLFLRHLALVVAHLADTLPWQINNEPRAQNTSS
>Mature_231_residues
SYVEGDTLTAEVVAEYLRDNPDFFQNRKDLVDRLAINNVEQGAVSLVEIQLKRQRHRIEELEEEITGLMSLAANNDKTFY
EFMDLQTQVLKCSDFIQVIKAVEQKALELGLKAHVRVLSQLGFYQLNEERYSKFSLNHFNGKDAYLGRLRKADRHDLFGD
YPVPELGSYVVLPLAKRSPLGVLAFSSEDGGHFQPHMDTLFLRHLALVVAHLADTLPWQINNEPRAQNTSS

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790243, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007435 [H]

Pfam domain/function: PF04340 DUF484 [H]

EC number: NA

Molecular weight: Translated: 26491; Mature: 26360

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVEGDTLTAEVVAEYLRDNPDFFQNRKDLVDRLAINNVEQGAVSLVEIQLKRQRHRIE
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ELEEEITGLMSLAANNDKTFYEFMDLQTQVLKCSDFIQVIKAVEQKALELGLKAHVRVLS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGFYQLNEERYSKFSLNHFNGKDAYLGRLRKADRHDLFGDYPVPELGSYVVLPLAKRSP
HHCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
LGVLAFSSEDGGHFQPHMDTLFLRHLALVVAHLADTLPWQINNEPRAQNTSS
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYVEGDTLTAEVVAEYLRDNPDFFQNRKDLVDRLAINNVEQGAVSLVEIQLKRQRHRIE
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ELEEEITGLMSLAANNDKTFYEFMDLQTQVLKCSDFIQVIKAVEQKALELGLKAHVRVLS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGFYQLNEERYSKFSLNHFNGKDAYLGRLRKADRHDLFGDYPVPELGSYVVLPLAKRSP
HHCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
LGVLAFSSEDGGHFQPHMDTLFLRHLALVVAHLADTLPWQINNEPRAQNTSS
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]