Click here to switch to the map view.

The map label for this gene is 218710909

Identifier: 218710909

GI number: 218710909

Start: 3161848

End: 3162267

Strand: Reverse

Name: 218710909

Synonym: VS_3011

Alternate gene names: NA

Gene position: 3162267-3161848 (Counterclockwise)

Preceding gene: 218710910

Following gene: 218710908

Centisome position: 95.85

GC content: 42.62

Gene sequence:

>420_bases
ATGAAATTGGAGAGTGTCATGAAAACAACAAGTAGACGTACTCAACGAGATTATTCTCTTGCCTTTAAATTGGCAGTCGT
AAGCCAAGTTGAAAAAGGCGAAATGACTTATAAGCAAGCTCAAGAACGTTATGGGATCCAAGGTCGCTCTACCGTTTTAG
TTTGGCTTCGCAAACATGGTCAACTAGATTGGTCTAAAGGAATAGAACAATCGAGAGCGTTAGGAGCGGCTATGTCAAAC
TCTTCCTCAACTCAAACCCCAGAGCAACGAATCAAAGAACTCGAGCAGCAATTAGAAGAAACTCAGCTCAAAGCTGAGTT
CTTTGAAGCGGTTGTAAAAGTCATGGATCGAGATTTCGGAGTCCGAATCTCAAAGAAGCGCAGGGCCGAGTTATTAAGGA
AAAAGCGGTCAGAAAGTTGA

Upstream 100 bases:

>100_bases
ATCAGCTTTACAAGTAAACGAACGCTAAAGAAAAAGGCACCCATTGGGTGCCTTTTTTGTTTGTGTGTACCGTCCTAAAT
ATGGTTGACACATTTCCAAC

Downstream 100 bases:

>100_bases
CCGTCACCAAAGCTTGTCACTTCATAGGTATTACACGACAAGCTTTCTACAAGCGCTGTGTTGCAGAAATTCATCAGACA
AAGAAAGATGAATCTGTGCT

Product: ISVisp4 transposase OrfA

Products: NA

Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKLESVMKTTSRRTQRDYSLAFKLAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSN
SSSTQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES

Sequences:

>Translated_139_residues
MKLESVMKTTSRRTQRDYSLAFKLAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSN
SSSTQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES
>Mature_139_residues
MKLESVMKTTSRRTQRDYSLAFKLAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSN
SSSTQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16129; Mature: 16129

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESVMKTTSRRTQRDYSLAFKLAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
QLDWSKGIEQSRALGAAMSNSSSTQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VRISKKRRAELLRKKRSES
CEECHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLESVMKTTSRRTQRDYSLAFKLAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
QLDWSKGIEQSRALGAAMSNSSSTQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VRISKKRRAELLRKKRSES
CEECHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA