Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710856

Identifier: 218710856

GI number: 218710856

Start: 3097736

End: 3099559

Strand: Direct

Name: 218710856

Synonym: VS_2940

Alternate gene names: NA

Gene position: 3097736-3099559 (Clockwise)

Preceding gene: 218710853

Following gene: 218710857

Centisome position: 93.89

GC content: 47.15

Gene sequence:

>1824_bases
ATGCCTGAAAAATTTAATATGCAGCACCCACCCTTCGATAGCCTGTCCGATACGGAACAATTGAAGCTTCGCTCTTCATT
AGACGTGGTGTATTACCGCTCTCAAGAAGTGATACTGGAAGCAGATAGGCCGAGCAGACACCTGCATATCCTGATCAAAG
GAGCCGTTGAAGAGCGCGCGAGCAGTGATGGTGAGATTTACGCACATTACGCCAATGACGATATTTTTGATGTGCGCAGC
CAGTTTGAACCTCACACCAAACATCAATATATCGCACTCGAAGACACCTTAAGCTACCTACTGCCTACCGATGTTTTTCT
CGATCTTTATCACGCCAATGGTCAATTTGCCGCCTACTTTGATAGTAACCTATCAACACGGAAAGCTCTGATTGAGGCCG
CTCAGCAGCAACAAAACCTTGCCGAGTTTATATTGACCAAAGTGGATGACTCTATTTATCACCCACCACTGATTCTTGAG
CCAGGGCAACCCATCAACCAAGTCACTCAAATCCTAAAAGAGCAAGGCTTAGACTCGGCGCTGGTGCATTTAGACGACAA
AGGCATAAAAGATTTTGGTTCAGGCTCCTTACCGTATGGGATCGTCACACGAACCAATTTATTGCACGCTGTAATGCTCG
ATAACTTCCCACAGGACGCGCCCGTTGGCGAGATTGCAACATTTCCAGTGATGCACGTAAACCAAGGGGATTTCTTATTT
AATGCCATGATTACCATGACCAGAAACCGGGTAAAAAGGTTGATGGTTTGTGACGGTCTAGATGCTGTCGGCATGGTGGA
TATGACACAAATCCTCAGTGCATTCTCCACTCACTCTCACGTGCTCACTTTGCGTATTGCGCGATCCACCAGCATTGAAG
AGCTCGCATTAGCCTCCAACAAACAACGTCAACTGGTCGAAAGCCTACTCAGTAACGGCATTCGCACGCGCTTCATCATG
GAGCTAATTTCAGCCGTTAATGAACAGATAATAGAGAAAGCGTTTGAGTTGGTTATCCCACCCGCACTGCATAATCATTG
CTGCCTCATCGTGTTGGGCTCCGAAGGCCGTGGAGAACAAATCCTCAAAACCGATCAAGACAACGCGCTAATAATTCAAG
ATGGCTTGGAGTGGCACCAATGCCAGAGTGCCATGAACGACCTCACTCACACATTGCAGCAATTGGGCTATCCACTATGT
CCGGGCAACGTGATGGTCAACAACCCCAAATGGGTGCATTCAGAACAAGAGTGGAAACAAACCCTCACCCGTTGGGTAAA
AAAAGCCACGCCAGATACCGTGATGAATATCGCGATCATGGCGGATGCACACGCCGTTGCGGGTAATAGAGAGTTATTAA
AACCCGTAAAGCAGCACCTAAGTGATTTGATGCTCGGACAAGAATTGATTCTGACTGAATTCTGCCGACCGGCTCTGAAC
TTCTCAGTACCCCTCACCCTGTTTGGCAATGTTAAACAATCCAAGTCAGGGCTCGATATCAAACAAGGCGGTATTTTCCC
TATCGTGCATGGTGTGAGGGCACTCTGTCTTGAGCATGGTGTCACGGTAAACAACACCTTCGAACGCATTGAACAGTTGG
TCTGTAAGAAAGTGCTTGAGCAAAGTACCGCCGATAACCTTAGTGAAGCACTCAAACAGTTCTTTAAGTGGCGCTTAGCC
CAAAGACTTTCTCAGCAGCACAGTAGCAACAAGATTAACGTCAAATTGATGGAGCGAGCAGACAGAGACTTACTTCGCCA
TAGCTTGCATGTGGTCAAAAAATTCAAGCAATGGCTTGGCTACCACTATCAGATACGGGATTAG

Upstream 100 bases:

>100_bases
CACGTTCATCGATATCTAGTCTGCATTTAGACTAAAGTCGTCTGGAGCTTCGCTGGTATTTTGTCAGACTGATTAAAGAC
TCCCACTTCTTGTGATGCTT

Downstream 100 bases:

>100_bases
GCGATTGAACGATGAATAGATTGGTTCGTTATTACTGGCATCATAAACTCAAAGGCTCTACTTATCAGCCTCTGTTTACT
GCGCCTGCTAATCACGAATA

Product: putative signal-transduction protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MPEKFNMQHPPFDSLSDTEQLKLRSSLDVVYYRSQEVILEADRPSRHLHILIKGAVEERASSDGEIYAHYANDDIFDVRS
QFEPHTKHQYIALEDTLSYLLPTDVFLDLYHANGQFAAYFDSNLSTRKALIEAAQQQQNLAEFILTKVDDSIYHPPLILE
PGQPINQVTQILKEQGLDSALVHLDDKGIKDFGSGSLPYGIVTRTNLLHAVMLDNFPQDAPVGEIATFPVMHVNQGDFLF
NAMITMTRNRVKRLMVCDGLDAVGMVDMTQILSAFSTHSHVLTLRIARSTSIEELALASNKQRQLVESLLSNGIRTRFIM
ELISAVNEQIIEKAFELVIPPALHNHCCLIVLGSEGRGEQILKTDQDNALIIQDGLEWHQCQSAMNDLTHTLQQLGYPLC
PGNVMVNNPKWVHSEQEWKQTLTRWVKKATPDTVMNIAIMADAHAVAGNRELLKPVKQHLSDLMLGQELILTEFCRPALN
FSVPLTLFGNVKQSKSGLDIKQGGIFPIVHGVRALCLEHGVTVNNTFERIEQLVCKKVLEQSTADNLSEALKQFFKWRLA
QRLSQQHSSNKINVKLMERADRDLLRHSLHVVKKFKQWLGYHYQIRD

Sequences:

>Translated_607_residues
MPEKFNMQHPPFDSLSDTEQLKLRSSLDVVYYRSQEVILEADRPSRHLHILIKGAVEERASSDGEIYAHYANDDIFDVRS
QFEPHTKHQYIALEDTLSYLLPTDVFLDLYHANGQFAAYFDSNLSTRKALIEAAQQQQNLAEFILTKVDDSIYHPPLILE
PGQPINQVTQILKEQGLDSALVHLDDKGIKDFGSGSLPYGIVTRTNLLHAVMLDNFPQDAPVGEIATFPVMHVNQGDFLF
NAMITMTRNRVKRLMVCDGLDAVGMVDMTQILSAFSTHSHVLTLRIARSTSIEELALASNKQRQLVESLLSNGIRTRFIM
ELISAVNEQIIEKAFELVIPPALHNHCCLIVLGSEGRGEQILKTDQDNALIIQDGLEWHQCQSAMNDLTHTLQQLGYPLC
PGNVMVNNPKWVHSEQEWKQTLTRWVKKATPDTVMNIAIMADAHAVAGNRELLKPVKQHLSDLMLGQELILTEFCRPALN
FSVPLTLFGNVKQSKSGLDIKQGGIFPIVHGVRALCLEHGVTVNNTFERIEQLVCKKVLEQSTADNLSEALKQFFKWRLA
QRLSQQHSSNKINVKLMERADRDLLRHSLHVVKKFKQWLGYHYQIRD
>Mature_606_residues
PEKFNMQHPPFDSLSDTEQLKLRSSLDVVYYRSQEVILEADRPSRHLHILIKGAVEERASSDGEIYAHYANDDIFDVRSQ
FEPHTKHQYIALEDTLSYLLPTDVFLDLYHANGQFAAYFDSNLSTRKALIEAAQQQQNLAEFILTKVDDSIYHPPLILEP
GQPINQVTQILKEQGLDSALVHLDDKGIKDFGSGSLPYGIVTRTNLLHAVMLDNFPQDAPVGEIATFPVMHVNQGDFLFN
AMITMTRNRVKRLMVCDGLDAVGMVDMTQILSAFSTHSHVLTLRIARSTSIEELALASNKQRQLVESLLSNGIRTRFIME
LISAVNEQIIEKAFELVIPPALHNHCCLIVLGSEGRGEQILKTDQDNALIIQDGLEWHQCQSAMNDLTHTLQQLGYPLCP
GNVMVNNPKWVHSEQEWKQTLTRWVKKATPDTVMNIAIMADAHAVAGNRELLKPVKQHLSDLMLGQELILTEFCRPALNF
SVPLTLFGNVKQSKSGLDIKQGGIFPIVHGVRALCLEHGVTVNNTFERIEQLVCKKVLEQSTADNLSEALKQFFKWRLAQ
RLSQQHSSNKINVKLMERADRDLLRHSLHVVKKFKQWLGYHYQIRD

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68772; Mature: 68641

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKFNMQHPPFDSLSDTEQLKLRSSLDVVYYRSQEVILEADRPSRHLHILIKGAVEERA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEECCCCCCEEEEEEEEHHHHHC
SSDGEIYAHYANDDIFDVRSQFEPHTKHQYIALEDTLSYLLPTDVFLDLYHANGQFAAYF
CCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHHHEEEECCCCEEEEE
DSNLSTRKALIEAAQQQQNLAEFILTKVDDSIYHPPLILEPGQPINQVTQILKEQGLDSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCE
LVHLDDKGIKDFGSGSLPYGIVTRTNLLHAVMLDNFPQDAPVGEIATFPVMHVNQGDFLF
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCEEECCCCCHHH
NAMITMTRNRVKRLMVCDGLDAVGMVDMTQILSAFSTHSHVLTLRIARSTSIEELALASN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCC
KQRQLVESLLSNGIRTRFIMELISAVNEQIIEKAFELVIPPALHNHCCLIVLGSEGRGEQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
ILKTDQDNALIIQDGLEWHQCQSAMNDLTHTLQQLGYPLCPGNVMVNNPKWVHSEQEWKQ
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHH
TLTRWVKKATPDTVMNIAIMADAHAVAGNRELLKPVKQHLSDLMLGQELILTEFCRPALN
HHHHHHHHCCCHHHHEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSVPLTLFGNVKQSKSGLDIKQGGIFPIVHGVRALCLEHGVTVNNTFERIEQLVCKKVLE
CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QSTADNLSEALKQFFKWRLAQRLSQQHSSNKINVKLMERADRDLLRHSLHVVKKFKQWLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
YHYQIRD
CCEEECC
>Mature Secondary Structure 
PEKFNMQHPPFDSLSDTEQLKLRSSLDVVYYRSQEVILEADRPSRHLHILIKGAVEERA
CCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEEECCCCCCEEEEEEEEHHHHHC
SSDGEIYAHYANDDIFDVRSQFEPHTKHQYIALEDTLSYLLPTDVFLDLYHANGQFAAYF
CCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEHHHHHHHHCCHHHHHEEEECCCCEEEEE
DSNLSTRKALIEAAQQQQNLAEFILTKVDDSIYHPPLILEPGQPINQVTQILKEQGLDSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCE
LVHLDDKGIKDFGSGSLPYGIVTRTNLLHAVMLDNFPQDAPVGEIATFPVMHVNQGDFLF
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCEEECCCCCHHH
NAMITMTRNRVKRLMVCDGLDAVGMVDMTQILSAFSTHSHVLTLRIARSTSIEELALASN
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCC
KQRQLVESLLSNGIRTRFIMELISAVNEQIIEKAFELVIPPALHNHCCLIVLGSEGRGEQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
ILKTDQDNALIIQDGLEWHQCQSAMNDLTHTLQQLGYPLCPGNVMVNNPKWVHSEQEWKQ
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHH
TLTRWVKKATPDTVMNIAIMADAHAVAGNRELLKPVKQHLSDLMLGQELILTEFCRPALN
HHHHHHHHCCCHHHHEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSVPLTLFGNVKQSKSGLDIKQGGIFPIVHGVRALCLEHGVTVNNTFERIEQLVCKKVLE
CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QSTADNLSEALKQFFKWRLAQRLSQQHSSNKINVKLMERADRDLLRHSLHVVKKFKQWLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
YHYQIRD
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA