| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710852
Identifier: 218710852
GI number: 218710852
Start: 3090858
End: 3091238
Strand: Direct
Name: 218710852
Synonym: VS_2936
Alternate gene names: NA
Gene position: 3090858-3091238 (Clockwise)
Preceding gene: 218710851
Following gene: 218710853
Centisome position: 93.68
GC content: 45.67
Gene sequence:
>381_bases ATGAAAGAGCAGCAGGTTCTTTATTCGAGGTTTTACAAAGCACAGGATCGCTTTGCTTCATTAGAACAAGTTCAAGGCCA TGAACCGTTTGTGATTCGAGAGTATATCGAGTGCGCACTCACGCTTTCTGCTTACTATGAAAAGCATGCCGCCCAAGAAA ACATCTTGTTGTGCGAGCTGTATCTGCGCCAAGTTTTCTTCCATTTGATTGAAGCAATTGAGTCTCCTGGCCGCAGTTTC ACCTTTCGTCATATCTGCCTAGACTCTATTCACTCGCCACTGTTTTATTTGAAACGACACTACTGCCAGCAGCCACAAGG CCAAGCGCGTTTCTTGAATCTCAGCCAAACACTACAACAAGTCCAAGCCCCACTTGGCTAA
Upstream 100 bases:
>100_bases TTCTTTTCCTACTCACTTTATAAAAAGAGAAACAAAGGGTTGTTTTTAAAATCTCATTTGATAATAATTATCATTAACAT TCATTAATGAGATGCAGATG
Downstream 100 bases:
>100_bases CAAGGATAGAAGATGACCCTACAATTTCGGATTGAAAAAGACAGCATGGGGGAAGTTAAAGTCCCTGCTGATGCGCTATA TCAAGCACAAACTCAACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKEQQVLYSRFYKAQDRFASLEQVQGHEPFVIREYIECALTLSAYYEKHAAQENILLCELYLRQVFFHLIEAIESPGRSF TFRHICLDSIHSPLFYLKRHYCQQPQGQARFLNLSQTLQQVQAPLG
Sequences:
>Translated_126_residues MKEQQVLYSRFYKAQDRFASLEQVQGHEPFVIREYIECALTLSAYYEKHAAQENILLCELYLRQVFFHLIEAIESPGRSF TFRHICLDSIHSPLFYLKRHYCQQPQGQARFLNLSQTLQQVQAPLG >Mature_126_residues MKEQQVLYSRFYKAQDRFASLEQVQGHEPFVIREYIECALTLSAYYEKHAAQENILLCELYLRQVFFHLIEAIESPGRSF TFRHICLDSIHSPLFYLKRHYCQQPQGQARFLNLSQTLQQVQAPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14900; Mature: 14900
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQQVLYSRFYKAQDRFASLEQVQGHEPFVIREYIECALTLSAYYEKHAAQENILLCEL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLRQVFFHLIEAIESPGRSFTFRHICLDSIHSPLFYLKRHYCQQPQGQARFLNLSQTLQQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VQAPLG HHCCCC >Mature Secondary Structure MKEQQVLYSRFYKAQDRFASLEQVQGHEPFVIREYIECALTLSAYYEKHAAQENILLCEL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLRQVFFHLIEAIESPGRSFTFRHICLDSIHSPLFYLKRHYCQQPQGQARFLNLSQTLQQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VQAPLG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA