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The map label for this gene is 218710793

Identifier: 218710793

GI number: 218710793

Start: 3023756

End: 3024397

Strand: Reverse

Name: 218710793

Synonym: VS_2876

Alternate gene names: NA

Gene position: 3024397-3023756 (Counterclockwise)

Preceding gene: 218710794

Following gene: 218710792

Centisome position: 91.67

GC content: 46.73

Gene sequence:

>642_bases
GTGGACTCAAGTGGCAAGGAGAGAAGCATGTTGCATCAAATTAACCTGCTGCCGTGGCGTGATGAGATTCGCGCTCAGCA
CAAGAAGCGTTTTATCCACCTAGTCATTCTTGGCGTCATCATTGCACTTACAGGGCAATGGGCGGTTGGTCACTATTTTC
AGGGTCAACAAGCCAAACAGCAAGCTCGCCTCAATTATCTTAATCAATACATTGCCGAGCTCGACCGACAAATTCAATCG
TTAAAAGTTGCAGAACAAGAACACAAAGCCATTCTGACTCGACTTGATGTCGTGGAGTCGTTACAGCTTGGCCGCAATAA
GACCACTGACTTTATGAACTTGATGCCGGAGCTGATTCCTGAGGGCGTGTATGTCGACAAGATAAAGATGAATGGTCAGG
AGATTGAGATGGCAGGTATCAGCGACAGTACGGCTCGTCTCGCCACAATGTTGGACAATCTAGAGCGTTCTGATTCTCTT
AAAAGGGTCGAGATGCACTCTATTATCCATAACCGAAAGCGCTTCAATAAAGAGTTTCAGACCTTCAAGGTCTCTTTTGT
GTTTAGCCCTGTTTCTTTAGAAAACACAACCGCAGAGAGCGCAACCGCGAGCAGAAGAGAGAAGGGGGCAAATCATGGCT
AA

Upstream 100 bases:

>100_bases
TCGCTCAATCCTTTATCGTTATTTGAGAACAAGGTGGCGAAGCGGCACCAACTGCCGATGAACTGGCAACATTTCGGCAT
TGCCGCGGGTATGGCGATGA

Downstream 100 bases:

>100_bases
CCTTCAAAGTAGGATTAGCTGGCAAAATAGTGTGAGCTTGCAAGATCTCGATGCTGATGAGATCACCGAATGGCCGTTGT
TGCCCCAACTGCTCGTTATT

Product: type IV pilus (Tfp) assembly protein PilN

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly; Type IV Pilus Assembly Protein PilN; Fimbrial Assembly Protein PilN; Fimbrial Assembly Protein; Periplasmic Sensor Signal Transduction Histidine Kinase; PilN Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type IV Pilus Biogenesis Fimbrial Assembly; Pili Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein; Tfp Pilus Assembly Protein; Type IV Pilus Biogenesis PilN; Type IV Pilus Assembly Protein Piln

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDSSGKERSMLHQINLLPWRDEIRAQHKKRFIHLVILGVIIALTGQWAVGHYFQGQQAKQQARLNYLNQYIAELDRQIQS
LKVAEQEHKAILTRLDVVESLQLGRNKTTDFMNLMPELIPEGVYVDKIKMNGQEIEMAGISDSTARLATMLDNLERSDSL
KRVEMHSIIHNRKRFNKEFQTFKVSFVFSPVSLENTTAESATASRREKGANHG

Sequences:

>Translated_213_residues
MDSSGKERSMLHQINLLPWRDEIRAQHKKRFIHLVILGVIIALTGQWAVGHYFQGQQAKQQARLNYLNQYIAELDRQIQS
LKVAEQEHKAILTRLDVVESLQLGRNKTTDFMNLMPELIPEGVYVDKIKMNGQEIEMAGISDSTARLATMLDNLERSDSL
KRVEMHSIIHNRKRFNKEFQTFKVSFVFSPVSLENTTAESATASRREKGANHG
>Mature_213_residues
MDSSGKERSMLHQINLLPWRDEIRAQHKKRFIHLVILGVIIALTGQWAVGHYFQGQQAKQQARLNYLNQYIAELDRQIQS
LKVAEQEHKAILTRLDVVESLQLGRNKTTDFMNLMPELIPEGVYVDKIKMNGQEIEMAGISDSTARLATMLDNLERSDSL
KRVEMHSIIHNRKRFNKEFQTFKVSFVFSPVSLENTTAESATASRREKGANHG

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24446; Mature: 24446

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSGKERSMLHQINLLPWRDEIRAQHKKRFIHLVILGVIIALTGQWAVGHYFQGQQAKQ
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH
QARLNYLNQYIAELDRQIQSLKVAEQEHKAILTRLDVVESLQLGRNKTTDFMNLMPELIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
EGVYVDKIKMNGQEIEMAGISDSTARLATMLDNLERSDSLKRVEMHSIIHNRKRFNKEFQ
CCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFKVSFVFSPVSLENTTAESATASRREKGANHG
HEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSSGKERSMLHQINLLPWRDEIRAQHKKRFIHLVILGVIIALTGQWAVGHYFQGQQAKQ
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH
QARLNYLNQYIAELDRQIQSLKVAEQEHKAILTRLDVVESLQLGRNKTTDFMNLMPELIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
EGVYVDKIKMNGQEIEMAGISDSTARLATMLDNLERSDSLKRVEMHSIIHNRKRFNKEFQ
CCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFKVSFVFSPVSLENTTAESATASRREKGANHG
HEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA