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The map label for this gene is 218710792

Identifier: 218710792

GI number: 218710792

Start: 3023134

End: 3023763

Strand: Reverse

Name: 218710792

Synonym: VS_2875

Alternate gene names: NA

Gene position: 3023763-3023134 (Counterclockwise)

Preceding gene: 218710793

Following gene: 218710791

Centisome position: 91.65

GC content: 46.19

Gene sequence:

>630_bases
ATGGCTAACCTTCAAAGTAGGATTAGCTGGCAAAATAGTGTGAGCTTGCAAGATCTCGATGCTGATGAGATCACCGAATG
GCCGTTGTTGCCCCAACTGCTCGTTATTCTGTTGCTGATGATATTAATCCAAGGTGTCGGGACTTGGCTGTATGTGCTGC
CTTTAGACGATGAACTGCAGCAGATGAAGCAGCAAGAGCAGACTTTGAAAGCAACATTAAGGATAAAAGCGAACAAGGTT
GCGGCTTTGCCTAAGCTTCAGAGTCAGTTGGATGAGCTAACCAGTCGCTACGACTATCTGTTAGAACAGTTGCCAGTTCA
AAAGGAGCTCGCCAGTATGTTGGCCTCAGTGAATGAACTTGGTTTGGATAATGCGCTAACCTTTACGCGCATTGATTGGG
GGCAAAAGCAGAACAAGGAATTCCTCTATCGGTTACCCCTCAATATTGAGCTAACCGGTGATTACCACGAGATTGGCGAT
TTCTCCGCGGCCATCGCAAAACTGCCGCGCATTATTAGCTTCGATGATGTGAATTGGCAGCGAGTCAGTCAAGAAAGTAG
CACGCTACATTTCAGGGTTCGAGCTTACACCTATCAGTTTAAATCGGAGGTGAATGATGAAATTCAGTAG

Upstream 100 bases:

>100_bases
TTTCAGACCTTCAAGGTCTCTTTTGTGTTTAGCCCTGTTTCTTTAGAAAACACAACCGCAGAGAGCGCAACCGCGAGCAG
AAGAGAGAAGGGGGCAAATC

Downstream 100 bases:

>100_bases
CGTCCTTTTGTCCCTATTGTTACTGCTTGTGCTTTCAGGCTGTAAAGCCAATCAGGATTCGTTAGAAGGTTTTGTGAGGA
AAGTTGAAGCTAAGGCGAGA

Product: fimbrial assembly protein PilO

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilO; Type IV Pilus Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Fimbrial Assembly Membrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Fimbrial Type-4 Assembly Transmembrane Protein

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MANLQSRISWQNSVSLQDLDADEITEWPLLPQLLVILLLMILIQGVGTWLYVLPLDDELQQMKQQEQTLKATLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNALTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDEIQ

Sequences:

>Translated_209_residues
MANLQSRISWQNSVSLQDLDADEITEWPLLPQLLVILLLMILIQGVGTWLYVLPLDDELQQMKQQEQTLKATLRIKANKV
AALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNALTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGD
FSAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDEIQ
>Mature_208_residues
ANLQSRISWQNSVSLQDLDADEITEWPLLPQLLVILLLMILIQGVGTWLYVLPLDDELQQMKQQEQTLKATLRIKANKVA
ALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNELGLDNALTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGDF
SAAIAKLPRIISFDDVNWQRVSQESSTLHFRVRAYTYQFKSEVNDEIQ

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24168; Mature: 24037

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLQSRISWQNSVSLQDLDADEITEWPLLPQLLVILLLMILIQGVGTWLYVLPLDDELQ
CCCCHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
QMKQQEQTLKATLRIKANKVAALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNEL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GLDNALTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGDFSAAIAKLPRIISFDDVNWQ
CCCCCEEEEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHH
RVSQESSTLHFRVRAYTYQFKSEVNDEIQ
HHCCCCCEEEEEEEHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ANLQSRISWQNSVSLQDLDADEITEWPLLPQLLVILLLMILIQGVGTWLYVLPLDDELQ
CCCHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
QMKQQEQTLKATLRIKANKVAALPKLQSQLDELTSRYDYLLEQLPVQKELASMLASVNEL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GLDNALTFTRIDWGQKQNKEFLYRLPLNIELTGDYHEIGDFSAAIAKLPRIISFDDVNWQ
CCCCCEEEEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHH
RVSQESSTLHFRVRAYTYQFKSEVNDEIQ
HHCCCCCEEEEEEEHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA