Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710781

Identifier: 218710781

GI number: 218710781

Start: 3010711

End: 3013314

Strand: Reverse

Name: 218710781

Synonym: VS_2864

Alternate gene names: NA

Gene position: 3013314-3010711 (Counterclockwise)

Preceding gene: 218710783

Following gene: 218710779

Centisome position: 91.33

GC content: 47.2

Gene sequence:

>2604_bases
GTGAAACGGATGGCTCTTTTACATAAACCTTCATTGCTAGCAGTGGCAATTGGTAGCTTGTTAACCACAAGCGCACATGC
TGATTTGTTTATTTCACAATATGTGGAAGGCGGCAGCTATAACAAAGCGGTTGAGATTGCCAATAACGGCGATAGCAGCA
TGAATTTAGATGGTTACTCGTTGGCGAAGTCTGCGAATGGTAATGGATCATGGGGCGCGACTTTATCTTTGAATGGCCAC
GTTTTAGCGCCCGGTGAAGTACTCGTGGTTGCGCACACCAGCGCAAGTGACGAAATTAAAGCGGCGGCTGATATTCTTAA
CGCGTCGATTGCTAATCACAATGGTGACGATCCGCTGGCTATCTTGAATTCAGATGGTTCGGTGCACGATGTTGTCGGTT
TGATGGGCGATGTGGACTGGGGTAAAGATGTTACTTTGGTTCGTGCTAAACAAACACCTTCTGCGACGTTTGATGCTTCG
CAATGGGTATCGTTACCTAAGGACAGTATTGAAGGGCTAGGTTCACTAGACAATGTAGAGTTGCCTGACGCGTTTGCCTG
TACACAAGATGGCTCTGCTCCTGTATTCACGACTATTCAAGAGATCCAAGGTGAAGGCGCAACATCACCGTTCATTGATG
GCTATCCATACATCACTGACGATGAATACTTCGTCAAAGGTGTGGTAAGTGCAGTCACTACTGGCATAACCAAAGGTTTC
TACCTGCAAGCACTTGAGGATGACTTCAATTCAAGCACTTCTGAAGGTCTATTTATCCACACCAATCAATCGAGTTCAGA
ACTGGCTGCGGGCGATGTAGTGTGTGTGAAAGGTAAGGTTCAAGAGTATTACAGTCATACTCAGCTTAAAGTTGAAAACA
ACCAATGGCTTAAGCAGGGCGAGCAACAAGCGCCTGAAGCGACAGTAATTGAAGCCTTAGACAGTGACGAGAACTTCGCT
GCAACGCTTGAACGCCATGAAGGCATGTTGGTGAAAACAACCGAAGCGCTTGATATGCGTGTAACGCGTACCTTTGGTTA
TGACTACGCAGGTCGTCGTAACAACATGGTACTGGCCCATGAGCGTATTAACATGCAGCCGAATCAGTTATCTGCAGCTG
GCTCTGAAGATGCGAAACAGCAAACTAAAGATAACGCAGACCGTCGTCTTTTTGTTGAAACCGATCAAAAAGCCGGTGAC
GGACAAGTTCCTTTCTATCCAGACTTTGGCCGTACCGATATTGACCAAGATGGTTCAACAGAAGACTACATCCGTATTGA
TGACACCATTGTTGGCCTAGAAGGCGTGCTGACTTACAGCTACGGCGAGTATCGCTTAGTGACAACCAACCAGATCTCGG
CTGAGAACTTTGTACGTAATGACCCACGTACTGACAAGCCTGATATGGATGAAGGTGATCTACGTATCGCGACCTTCAAC
GTATTGAACTACTTTAACTCTCCATTTGGCGGTGACGCGAACCAACACGGCAACAACCGTGGCGCGAACACCATCACTGA
GTTTGAGATGCAGCAAGAGAAGATTGTGAACGCGATTCTTCGTCTAGATGCCGACATCATTGGTTTGATGGAAATTGAGA
ACAACGGTTTTGGTGAAGGCTCTGCCATTCAGCAGCTTGTAAACCAACTGAATGATCGCATTGAGCGTAAGAAAGACCGT
TATACCTTTGTGGCCGTGGACTCTAACGAAGATGGCGTAACCGACGAGATGGACTCGATTGGTACTGACGTCATTACAAC
AGGTGTTATCTACCGTAAGAAAGTGGTTAAGCTTAAAGACAGCCGTGTTATCGCGATGCCAAGCCAACAAGCGCCAGAAG
TGTTAGACGATTCAGGCAAGGTGATTGAAGACGGTAAGAACTATCAACGTGACTCATTGGCGCCAACTTTTAAAGTCAAA
GGCACCAAAGAGAAACTGACCGTTGCGATTAACCACTTTAAATCGAAAGGTTCTAAGTGTTGGGAAGATGCAGCCCCTGT
AGAACAGGGCGGTCAAGGTGGCGTTGATGCCGACAAGCAAGGTTCATGTGAGAACTTCCGTGTTGCAGCTGCAGTTGCAC
TGGGTGAAGCGCTAGATGGCATCAAAGGCCATAAAGTGATTCTGGGTGATATGAACTCGTACGGCATGGAAGACCCAATG
CTGGTACTGACGGATTACTCTGAAGAGAAATACGGTAAGCAAATCAAAGCGGCGCGTAACACTTACATTGACGGTGTCGA
GCAGTTTGGTGATAACGGTGCGGTGATTACCAAGAACTACGGCTACATTAATGCTGTGGCTCAAAAGCACCCAGACAGCT
GGAGCTACTCATACAATGATGAGGTTGGCGCTTTGGATCACCTGTTGATCAGCGACAGCCTGAAAGACATGGTGGTGGAT
GCGACTGACTGGCACATCAACGGCGGTGAATCGAAGTTGCTTGATTACAACGAAGAGTTCAAAGGTGATCTGCCGAAGTA
CCAAGATCACTTCCGTTCATCGGATCATGATCCGGCAGTTCTTGAGCTTAAAGTCGGTGGTTCGTTTGGTTTCGGTGCAC
TGATGTCATTGTTTGGCTTAGCAATGTGGCGTCGTCGTAAGTAA

Upstream 100 bases:

>100_bases
TCTTGCCAACTGACTTATTCCTTTCATAAATAAACCTGATAGTTACCACAAAATACATGACTGCCCATAGATGGCAGTGA
CTATAAATCGATGAACTTAG

Downstream 100 bases:

>100_bases
TAAGGCTTTTCGAGTCATAATAAACCGCTACCTATAGGTAGCGGTTTATATTTTAGCTACTCATTGATACCAATCGTAGT
AAATAACTGTTCACCCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease I; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; Endonuclease/Exonuclease/Phosphatase Family; 5-Nucleotidase; PKD Domain-Containing Protein; Alkaline Phosphatase; Exported Nuclease; Endonuclease/Exonuclease/PhosphataseEndonuclease I; Outer Membrane Adhesin Like Proteiin; Extracellular Ribonuclease; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; DNA/RNA Non-Specific Endonuclease; Extracellular Nuclease/Phosphatase; 50S Ribosomal Type B; 5-Nucleotidase Family Protein

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MKRMALLHKPSLLAVAIGSLLTTSAHADLFISQYVEGGSYNKAVEIANNGDSSMNLDGYSLAKSANGNGSWGATLSLNGH
VLAPGEVLVVAHTSASDEIKAAADILNASIANHNGDDPLAILNSDGSVHDVVGLMGDVDWGKDVTLVRAKQTPSATFDAS
QWVSLPKDSIEGLGSLDNVELPDAFACTQDGSAPVFTTIQEIQGEGATSPFIDGYPYITDDEYFVKGVVSAVTTGITKGF
YLQALEDDFNSSTSEGLFIHTNQSSSELAAGDVVCVKGKVQEYYSHTQLKVENNQWLKQGEQQAPEATVIEALDSDENFA
ATLERHEGMLVKTTEALDMRVTRTFGYDYAGRRNNMVLAHERINMQPNQLSAAGSEDAKQQTKDNADRRLFVETDQKAGD
GQVPFYPDFGRTDIDQDGSTEDYIRIDDTIVGLEGVLTYSYGEYRLVTTNQISAENFVRNDPRTDKPDMDEGDLRIATFN
VLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLMEIENNGFGEGSAIQQLVNQLNDRIERKKDR
YTFVAVDSNEDGVTDEMDSIGTDVITTGVIYRKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVK
GTKEKLTVAINHFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDMNSYGMEDPM
LVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHPDSWSYSYNDEVGALDHLLISDSLKDMVVD
ATDWHINGGESKLLDYNEEFKGDLPKYQDHFRSSDHDPAVLELKVGGSFGFGALMSLFGLAMWRRRK

Sequences:

>Translated_867_residues
MKRMALLHKPSLLAVAIGSLLTTSAHADLFISQYVEGGSYNKAVEIANNGDSSMNLDGYSLAKSANGNGSWGATLSLNGH
VLAPGEVLVVAHTSASDEIKAAADILNASIANHNGDDPLAILNSDGSVHDVVGLMGDVDWGKDVTLVRAKQTPSATFDAS
QWVSLPKDSIEGLGSLDNVELPDAFACTQDGSAPVFTTIQEIQGEGATSPFIDGYPYITDDEYFVKGVVSAVTTGITKGF
YLQALEDDFNSSTSEGLFIHTNQSSSELAAGDVVCVKGKVQEYYSHTQLKVENNQWLKQGEQQAPEATVIEALDSDENFA
ATLERHEGMLVKTTEALDMRVTRTFGYDYAGRRNNMVLAHERINMQPNQLSAAGSEDAKQQTKDNADRRLFVETDQKAGD
GQVPFYPDFGRTDIDQDGSTEDYIRIDDTIVGLEGVLTYSYGEYRLVTTNQISAENFVRNDPRTDKPDMDEGDLRIATFN
VLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLMEIENNGFGEGSAIQQLVNQLNDRIERKKDR
YTFVAVDSNEDGVTDEMDSIGTDVITTGVIYRKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVK
GTKEKLTVAINHFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDMNSYGMEDPM
LVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHPDSWSYSYNDEVGALDHLLISDSLKDMVVD
ATDWHINGGESKLLDYNEEFKGDLPKYQDHFRSSDHDPAVLELKVGGSFGFGALMSLFGLAMWRRRK
>Mature_867_residues
MKRMALLHKPSLLAVAIGSLLTTSAHADLFISQYVEGGSYNKAVEIANNGDSSMNLDGYSLAKSANGNGSWGATLSLNGH
VLAPGEVLVVAHTSASDEIKAAADILNASIANHNGDDPLAILNSDGSVHDVVGLMGDVDWGKDVTLVRAKQTPSATFDAS
QWVSLPKDSIEGLGSLDNVELPDAFACTQDGSAPVFTTIQEIQGEGATSPFIDGYPYITDDEYFVKGVVSAVTTGITKGF
YLQALEDDFNSSTSEGLFIHTNQSSSELAAGDVVCVKGKVQEYYSHTQLKVENNQWLKQGEQQAPEATVIEALDSDENFA
ATLERHEGMLVKTTEALDMRVTRTFGYDYAGRRNNMVLAHERINMQPNQLSAAGSEDAKQQTKDNADRRLFVETDQKAGD
GQVPFYPDFGRTDIDQDGSTEDYIRIDDTIVGLEGVLTYSYGEYRLVTTNQISAENFVRNDPRTDKPDMDEGDLRIATFN
VLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLMEIENNGFGEGSAIQQLVNQLNDRIERKKDR
YTFVAVDSNEDGVTDEMDSIGTDVITTGVIYRKKVVKLKDSRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVK
GTKEKLTVAINHFKSKGSKCWEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDMNSYGMEDPM
LVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHPDSWSYSYNDEVGALDHLLISDSLKDMVVD
ATDWHINGGESKLLDYNEEFKGDLPKYQDHFRSSDHDPAVLELKVGGSFGFGALMSLFGLAMWRRRK

Specific function: Unknown

COG id: COG2374

COG function: function code R; Predicted extracellular nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94695; Mature: 94695

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMALLHKPSLLAVAIGSLLTTSAHADLFISQYVEGGSYNKAVEIANNGDSSMNLDGYS
CCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHH
LAKSANGNGSWGATLSLNGHVLAPGEVLVVAHTSASDEIKAAADILNASIANHNGDDPLA
HHCCCCCCCCCEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEE
ILNSDGSVHDVVGLMGDVDWGKDVTLVRAKQTPSATFDASQWVSLPKDSIEGLGSLDNVE
EECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC
LPDAFACTQDGSAPVFTTIQEIQGEGATSPFIDGYPYITDDEYFVKGVVSAVTTGITKGF
CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCC
YLQALEDDFNSSTSEGLFIHTNQSSSELAAGDVVCVKGKVQEYYSHTQLKVENNQWLKQG
EEEEHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCHHHHHH
EQQAPEATVIEALDSDENFAATLERHEGMLVKTTEALDMRVTRTFGYDYAGRRNNMVLAH
HHCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECHHHCEEEEEECCCCCCCCCCCEEEEE
ERINMQPNQLSAAGSEDAKQQTKDNADRRLFVETDQKAGDGQVPFYPDFGRTDIDQDGST
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
EDYIRIDDTIVGLEGVLTYSYGEYRLVTTNQISAENFVRNDPRTDKPDMDEGDLRIATFN
CCEEEECCEEECCEEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEE
VLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLMEIENNGFGEG
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
SAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIYRKKVVKLKD
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHEEECC
SRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAINHFKSKGSKC
CEEEECCCCCCCHHHCCCCCEEECCCCCCCCCCCCEEEECCCHHEEEEEEEHHHCCCCHH
WEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDMNSYGMEDPM
HHCCCCHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCE
LVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHPDSWSYSYND
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHCCCCCCCCCCCC
EVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHFRSSDHDPAV
CCCHHHHHHHHHCHHHHEEECCCEEECCCCCCEECCCHHHCCCCCHHHHHHCCCCCCCEE
LELKVGGSFGFGALMSLFGLAMWRRRK
EEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRMALLHKPSLLAVAIGSLLTTSAHADLFISQYVEGGSYNKAVEIANNGDSSMNLDGYS
CCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHH
LAKSANGNGSWGATLSLNGHVLAPGEVLVVAHTSASDEIKAAADILNASIANHNGDDPLA
HHCCCCCCCCCEEEEEECCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEE
ILNSDGSVHDVVGLMGDVDWGKDVTLVRAKQTPSATFDASQWVSLPKDSIEGLGSLDNVE
EECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC
LPDAFACTQDGSAPVFTTIQEIQGEGATSPFIDGYPYITDDEYFVKGVVSAVTTGITKGF
CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCC
YLQALEDDFNSSTSEGLFIHTNQSSSELAAGDVVCVKGKVQEYYSHTQLKVENNQWLKQG
EEEEHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCHHHHHH
EQQAPEATVIEALDSDENFAATLERHEGMLVKTTEALDMRVTRTFGYDYAGRRNNMVLAH
HHCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECHHHCEEEEEECCCCCCCCCCCEEEEE
ERINMQPNQLSAAGSEDAKQQTKDNADRRLFVETDQKAGDGQVPFYPDFGRTDIDQDGST
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
EDYIRIDDTIVGLEGVLTYSYGEYRLVTTNQISAENFVRNDPRTDKPDMDEGDLRIATFN
CCEEEECCEEECCEEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEE
VLNYFNSPFGGDANQHGNNRGANTITEFEMQQEKIVNAILRLDADIIGLMEIENNGFGEG
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
SAIQQLVNQLNDRIERKKDRYTFVAVDSNEDGVTDEMDSIGTDVITTGVIYRKKVVKLKD
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHEEECC
SRVIAMPSQQAPEVLDDSGKVIEDGKNYQRDSLAPTFKVKGTKEKLTVAINHFKSKGSKC
CEEEECCCCCCCHHHCCCCCEEECCCCCCCCCCCCEEEECCCHHEEEEEEEHHHCCCCHH
WEDAAPVEQGGQGGVDADKQGSCENFRVAAAVALGEALDGIKGHKVILGDMNSYGMEDPM
HHCCCCHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCE
LVLTDYSEEKYGKQIKAARNTYIDGVEQFGDNGAVITKNYGYINAVAQKHPDSWSYSYND
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHCCCCCCCCCCCC
EVGALDHLLISDSLKDMVVDATDWHINGGESKLLDYNEEFKGDLPKYQDHFRSSDHDPAV
CCCHHHHHHHHHCHHHHEEECCCEEECCCCCCEECCCHHHCCCCCHHHHHHCCCCCCCEE
LELKVGGSFGFGALMSLFGLAMWRRRK
EEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA