| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710722
Identifier: 218710722
GI number: 218710722
Start: 2966398
End: 2966544
Strand: Direct
Name: 218710722
Synonym: VS_2805
Alternate gene names: NA
Gene position: 2966398-2966544 (Clockwise)
Preceding gene: 218710721
Following gene: 218710760
Centisome position: 89.91
GC content: 40.14
Gene sequence:
>147_bases TTGTGCGCTGAACAAAAGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATATTATTGAG AAATGGAGCAGAGAAGGTAAAGAAAAGTGCCAAATATCGTGGTGCAATTCTTATGTCGGTCTCCTAA
Upstream 100 bases:
>100_bases CAACAAGCGGTCTCGTTGATTCACTCGAAGCTATTTGGTTGTAATAACCAGTGATTAATAATTGATTTAAAATACTTAAA GGGCGCTTCGGTGCTCTTTT
Downstream 100 bases:
>100_bases TTCTACAGATACAAAAAAGCCGAGCTAATGCTCGGCTTTTGTATTAAGAATCTAGTATAGATTACTCAGCAGCTTCTTCA GCAGCTGGGCGGTCTACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MCAEQKRYEIRDTRYEIRDTRYEILLRNGAEKVKKSAKYRGAILMSVS
Sequences:
>Translated_48_residues MCAEQKRYEIRDTRYEIRDTRYEILLRNGAEKVKKSAKYRGAILMSVS >Mature_48_residues MCAEQKRYEIRDTRYEIRDTRYEILLRNGAEKVKKSAKYRGAILMSVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5741; Mature: 5741
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAEQKRYEIRDTRYEIRDTRYEILLRNGAEKVKKSAKYRGAILMSVS CCCCCCCCCCCCCHHHHCCHHEEHHHHCCHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MCAEQKRYEIRDTRYEIRDTRYEILLRNGAEKVKKSAKYRGAILMSVS CCCCCCCCCCCCCHHHHCCHHEEHHHHCCHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA