| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is mlaE [H]
Identifier: 218710669
GI number: 218710669
Start: 2914805
End: 2915590
Strand: Reverse
Name: mlaE [H]
Synonym: VS_2749
Alternate gene names: 218710669
Gene position: 2915590-2914805 (Counterclockwise)
Preceding gene: 218710670
Following gene: 218710668
Centisome position: 88.37
GC content: 46.44
Gene sequence:
>786_bases TTGAATATGATTGCTAAAACTATTGCGGGTGTCGGTAAGCGTGCACTTGCGATCTGTGAGTCATTTGGTCGAGCAAGCCT AATGCTATTTGGGGCTTTGTTTGGCATCCCGAAACTAAAAAACTTCCCTCTATTAGTTAAACAATTTTATAGCGTTGGCG TTCAGTCATTGGCTATCATTTTAGTTTCGGGCTTGTTTATTGGCATGGTACTCAGTCTGCAGGGTTATGTCGTATTAATC GACTATGGCGCAGAGGGTAATCTTGGGCAAATGGTCGCGCTCTCGTTGTTACGGGAATTGGGTCCTGTGGTGACAGCACT TCTGTTTGCTGGCCGTGCGGGTTCAGCATTAACGGCTGAGATCGGCTTAATGAAAGCAACGGAACAGATCTCTAGCCTTG AGATGATGGCGGTTGATCCTCTTAAACGCATTATTGCGCCACGTCTCTGGGCCGGCCTTATTTCTATGCCACTGCTCGCT ATGATTTTTATGGCGGTCGGGATTTGGGGTGCTCAGTTAGTCGGTGTGGATTGGAAAGGTATTGACCACGGCAGTTTCTG GTCTGCGATGCAGTCTTCCGTTGAGCTTGGCCGTGATATTGGTAACAGTATGATCAAATGCATGGTCTTCGCTATCACCG TAACTTGGATCGCACTTTTTAATGGTTATGATGCAGTACCGACATCCGAAGGTATTAGTCAGGCAACCACACGCACAGTA GTACACTCTTCTCTAGCGGTATTAGGGCTAGATTTTGTTCTTACCGCATTGATGTTTGGGAATTAA
Upstream 100 bases:
>100_bases TACAACAACAGCGACCCAAGAGTGCAGCAATTTTTGCAAGGTGAATCGGATGGCCCTGTGCCATTTAGGTTTCCTGCAAA TAGCTTAGAAAAGGATTTGT
Downstream 100 bases:
>100_bases TCATGCAACAAACTCGAAAATTAGAATTATGGGCCGGCACCTTTGTTATTGCCGGAATTTGCGCAATCTTAATCATGATC TTTCAAGTCGCTGACGTAAA
Product: ABC transport protein: transmembrane protein (IM)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNMIAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPLLVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLI DYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLA MIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTV VHSSLAVLGLDFVLTALMFGN
Sequences:
>Translated_261_residues MNMIAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPLLVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLI DYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLA MIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTV VHSSLAVLGLDFVLTALMFGN >Mature_261_residues MNMIAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPLLVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLI DYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLA MIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTV VHSSLAVLGLDFVLTALMFGN
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=260, Percent_Identity=70.7692307692308, Blast_Score=367, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27767; Mature: 27767
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPLLVKQFYSVGVQSLAII CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC IDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VHSSLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMIAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPLLVKQFYSVGVQSLAII CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC IDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VHSSLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]